Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_H14
         (515 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    64   8e-11
AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...    64   8e-11
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...    64   8e-11
BT024293-1|ABC86355.1|  485|Drosophila melanogaster IP12678p pro...    29   4.9  
AE014134-582|AAF51126.1|  485|Drosophila melanogaster CG8837-PA ...    29   4.9  

>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 32/53 (60%), Positives = 36/53 (67%)
 Frame = +3

Query: 168 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 326
           KVTWTVLYRRK +KG EEE               IVGASL++I+AKRNMKPEV
Sbjct: 7   KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59


>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 32/53 (60%), Positives = 36/53 (67%)
 Frame = +3

Query: 168 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 326
           KVTWTVLYRRK +KG EEE               IVGASL++I+AKRNMKPEV
Sbjct: 48  KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1

Query: 25 MKIGLCAYSGYKIYPGHGKTM 87
          MKIGLCA+SGYKIYPGHGKTM
Sbjct: 1  MKIGLCAFSGYKIYPGHGKTM 21



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +2

Query: 92  KVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 235
           K+DGK+FTFL+ KCE ++LM+RNPR        + + +KG     SK+
Sbjct: 23  KIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKK 70


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 32/53 (60%), Positives = 36/53 (67%)
 Frame = +3

Query: 168 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 326
           KVTWTVLYRRK +KG EEE               IVGASL++I+AKRNMKPEV
Sbjct: 48  KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1

Query: 25 MKIGLCAYSGYKIYPGHGKTM 87
          MKIGLCA+SGYKIYPGHGKTM
Sbjct: 1  MKIGLCAFSGYKIYPGHGKTM 21



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +2

Query: 92  KVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 235
           K+DGK+FTFL+ KCE ++LM+RNPR        + + +KG     SK+
Sbjct: 23  KIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKK 70


>BT024293-1|ABC86355.1|  485|Drosophila melanogaster IP12678p
           protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 183 QSMLLXRGFLLIK-WAASHFEFRNVKVFPSTLXHGLAMAWIYFVSTI 46
           +S+LL  G L I  WA  HF +  V ++ S L  G+A    + V  I
Sbjct: 86  KSVLLCSGLLQISGWACIHFGYDIVHIYASRLFAGVASGAAFVVLPI 132


>AE014134-582|AAF51126.1|  485|Drosophila melanogaster CG8837-PA
           protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 183 QSMLLXRGFLLIK-WAASHFEFRNVKVFPSTLXHGLAMAWIYFVSTI 46
           +S+LL  G L I  WA  HF +  V ++ S L  G+A    + V  I
Sbjct: 86  KSVLLCSGLLQISGWACIHFGYDIVHIYASRLFAGVASGAAFVVLPI 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,161,019
Number of Sequences: 53049
Number of extensions: 327702
Number of successful extensions: 662
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)