Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_H06
(539 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 64 1e-11
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 6e-05
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 40 3e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.015
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.027
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.11
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.11
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.19
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.44
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 29 0.58
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.0
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 27 1.3
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 4.1
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 25 5.4
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 25 7.2
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 64.5 bits (150), Expect = 1e-11
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = +1
Query: 262 QADRRRPALQGYRRCLRPYPQGAGVSFSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 435
+A R +G C + GV S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 63 RAGRLSHRYKGIGECFKRTAAEEGV-ISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 61.3 bits (142), Expect = 9e-11
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +2
Query: 158 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 334
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +2
Query: 158 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 334
FA + +GG + A S V ++ + L S + ++++ G+VD + + + G
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDG 190
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.9 bits (94), Expect = 6e-05
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +2
Query: 173 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 334
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +G
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREG 71
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.5 bits (88), Expect = 3e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 164 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 319
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHI 69
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.015
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 146 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 244
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +2
Query: 170 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 265
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.027
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 170 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 334
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEG 82
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.1 bits (67), Expect = 0.11
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 149 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 328
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 329 QG 334
G
Sbjct: 164 YG 165
Score = 29.9 bits (64), Expect = 0.25
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 155 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 331
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 332 G 334
G
Sbjct: 70 G 70
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.1 bits (67), Expect = 0.11
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 173 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGSP 340
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G P
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIP 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.19
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 107 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 247
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.44
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 173 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 262
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 479 RSNARTASSCQHRPRNTCLYLSLKAKLSAWV 387
R NA ++ +H P++ C Y S KA L WV
Sbjct: 359 RRNALLLAADKHLPKSVCKYHSPKAGLFLWV 389
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 164 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 253
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 161 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQ 331
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQE 155
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 312 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 205
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 5.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 503 HHRRPDYQRSNARTASSCQHRPRNTCLYLSLKAKLSAWVGKYLMTLAKLPRQNE 342
H++ DY+ SN + H P L+L+ KAK+ +G+ L R E
Sbjct: 375 HYKLGDYEESNYWLNLAIDHTPTYPELFLA-KAKIFLCMGEIEEALCSFKRSVE 427
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 521 ERWLRRHHRRPDYQRSNARTASSCQHRPRN 432
E WL ++ Q++ A +++ Q RP+N
Sbjct: 275 EAWLAAQQQQKSLQQAKANHSANVQSRPKN 304
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,964,255
Number of Sequences: 5004
Number of extensions: 34411
Number of successful extensions: 130
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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