Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_H03
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...   237   5e-63
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...   230   7e-61
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...   230   7e-61
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am...    29   2.1  
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am...    29   2.1  

>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score =  237 bits (580), Expect = 5e-63
 Identities = 102/168 (60%), Positives = 137/168 (81%)
 Frame = +1

Query: 127 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 306
           K +PNRLIV+++  DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE+V I++SD++CP+
Sbjct: 26  KVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPN 85

Query: 307 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 486
           EK+RM             DVVSI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPYF
Sbjct: 86  EKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYF 145

Query: 487 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGE 630
           +EAYRP+H+ D F V+  MR VEFKVVET+P+P CIV+PDT+IH +G+
Sbjct: 146 LEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGD 193


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  230 bits (562), Expect = 7e-61
 Identities = 104/168 (61%), Positives = 136/168 (80%)
 Frame = +1

Query: 127 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 306
           K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26  KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85

Query: 307 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 486
           +KI+M             DVVSI+    ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86  DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144

Query: 487 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGE 630
            +AYRP+H+ D F V+  MR VEFKVVETDP+P CIVAPDTVIH +G+
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGD 192


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  230 bits (562), Expect = 7e-61
 Identities = 104/168 (61%), Positives = 136/168 (80%)
 Frame = +1

Query: 127 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 306
           K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26  KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85

Query: 307 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 486
           +KI+M             DVVSI+    ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86  DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144

Query: 487 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGE 630
            +AYRP+H+ D F V+  MR VEFKVVETDP+P CIVAPDTVIH +G+
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGD 192


>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
           amphipath transporters(subfamily iv p-type atpase)
           protein 4, isoform a protein.
          Length = 1212

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 567 DHFELDGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 460
           D+ + D    PPD  GVVT ++   S++ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258


>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
           amphipath transporters(subfamily iv p-type atpase)
           protein 4, isoform b protein.
          Length = 1454

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 567 DHFELDGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 460
           D+ + D    PPD  GVVT ++   S++ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,151,713
Number of Sequences: 27780
Number of extensions: 314023
Number of successful extensions: 788
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)