Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_G22
(490 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1821 + 40126389-40126508,40126589-40126646,40126782-401268... 42 3e-04
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 38 0.003
04_04_0010 - 22137258-22137428,22137734-22137794,22137917-221379... 38 0.006
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 35 0.030
05_03_0369 - 13136146-13136175,13136237-13136908,13136926-131370... 31 0.66
07_03_0690 - 20714691-20714922,20715498-20715572,20715914-207160... 30 1.1
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 30 1.1
02_05_0450 - 29117826-29118212,29118307-29118733,29119158-291192... 29 1.5
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 29 2.6
10_01_0129 + 1535823-1537196 29 2.6
07_01_0614 - 4545306-4545833 29 2.6
04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 29 2.6
03_06_0497 - 34332310-34334415 29 2.6
05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870 28 3.5
01_06_0985 - 33594588-33595451,33597655-33598518 28 3.5
10_01_0202 + 2178297-2178406,2180725-2180980,2181838-2181912,218... 27 6.1
12_02_1056 - 25728449-25728682,25728964-25729017 27 8.1
09_06_0145 + 21162308-21163666 27 8.1
07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409... 27 8.1
04_01_0343 - 4481651-4482553,4485144-4485857 27 8.1
03_01_0552 - 4115392-4115542,4115636-4115703,4115794-4115886,411... 27 8.1
01_05_0421 + 21990034-21990392,21991691-21992681 27 8.1
>01_06_1821 +
40126389-40126508,40126589-40126646,40126782-40126837,
40127076-40127176,40127336-40127405,40127501-40127570,
40127970-40128026,40128110-40128177,40128258-40128338,
40128474-40128551,40128644-40128799,40128874-40128933,
40129253-40129317,40130002-40130059
Length = 365
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 292 CVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPP 456
CV A G NPPVL HG A S+R ++ ++ + ++ I D G G SD+ P
Sbjct: 115 CVEA-GSSSNPPVLFIHGFPSQAYSYRNVLPVVSDNYHAIAFDWLGFGFSDKPQP 168
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1
Query: 322 PPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPG 459
PP+LL HG S +R I ++ E + IDL G G SD+ PPG
Sbjct: 119 PPLLLVHGFGASVGHWRRNIGVLSESYTVYAIDLLGFGASDK-PPG 163
>04_04_0010 -
22137258-22137428,22137734-22137794,22137917-22137984,
22138524-22138733,22138867-22138907,22139011-22139060,
22139260-22139348,22139468-22139542,22139791-22139882,
22140131-22140182,22140515-22140631,22141267-22141496,
22141618-22141672,22141781-22141900
Length = 476
Score = 37.5 bits (83), Expect = 0.006
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -1
Query: 478 RIC*SSGPAGTGPTCRSPGGLCL*NKTSRASI*LEGGSWSRSLLGHGRAEPGDCSNRPKP 299
RIC + G CRS G + + AS + G+ +R LLG G A G CS++ K
Sbjct: 79 RICIAESLMGHWLPCRSDGKASSHHGVAAASAAVVSGAGARRLLGEGTAGSGHCSSKGKV 138
Query: 298 PRTS 287
P S
Sbjct: 139 PLLS 142
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 307 GDCCNPPVLL-CHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSD 444
GDC + V+L HG ++ + P++K + I +DLPG G+S+
Sbjct: 1475 GDCTHEKVILFLHGFLGTSEDWVPMMKALSPSARVIAVDLPGHGESE 1521
>05_03_0369 -
13136146-13136175,13136237-13136908,13136926-13137016,
13137184-13137416,13137459-13137731,13137877-13138265,
13138325-13139156,13139847-13139922,13140027-13140414,
13141395-13141748,13142069-13142333,13143366-13143716
Length = 1317
Score = 30.7 bits (66), Expect = 0.66
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +3
Query: 273 GSLGPDVRGGLGRLLQSPGSALPWPSRLRDQLPPSNQIDAREVLFYRHRP 422
G G DVRGGL R + G P S + PP +Q D R V H P
Sbjct: 446 GKGGRDVRGGLRRCRRREGGRRP-DSPTTEGRPPISQKDDRLVTLTMHDP 494
>07_03_0690 -
20714691-20714922,20715498-20715572,20715914-20716006,
20716177-20716209,20717521-20717710,20717992-20718061,
20718215-20718370,20718529-20718555
Length = 291
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 288 DVRGGLGRLLQSPGSALP-WPSRLRDQLPPSNQIDAREVLFY 410
D GGLGRL+ +P + P SR + P + +D R V+F+
Sbjct: 103 DDMGGLGRLVHTPVAGTPGGKSRRLGRQPAAPWLDPRRVVFF 144
>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 286 RMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPE 396
++ + W CC P LLC G D+ +++ L+ L+ E
Sbjct: 965 KLLPIGWTACCASPSLLCEG--DTVLAYQQLVLLLIE 999
>02_05_0450 -
29117826-29118212,29118307-29118733,29119158-29119296,
29119426-29119530,29119624-29119705
Length = 379
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 325 PVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDR 447
P++L HG SA +R I + +K+ IDL G G S++
Sbjct: 94 PIVLIHGFGASAFHWRYNIPELAKKYKVYAIDLLGFGWSEK 134
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 KEWYIQVPWGRMCVVAWGDCCNPPVLLCHGLADSATSFR-PLIKLMPEKFYFIGIDLPGC 432
+ W V + V G PPVLL HG + S+R + L F + DL G
Sbjct: 7 RHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMAALAARGFRALAPDLRGY 66
Query: 433 GKS 441
G S
Sbjct: 67 GDS 69
>10_01_0129 + 1535823-1537196
Length = 457
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -1
Query: 460 GPAGTGPTCRSPGGLCL*NKTSRASI*LE-GGSWSRSLLGHGRAEPGDCSNRPKPPRTSG 284
G G P PGG N + R+S GS S G R+ P D +P PPR
Sbjct: 15 GGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSGSSPTSSPGQIRSPPDDGDGQPPPPRRRR 74
Query: 283 PKEP 272
EP
Sbjct: 75 RGEP 78
>07_01_0614 - 4545306-4545833
Length = 175
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 262 WYIQVPWGRMCVVAWGDCCNPPVLLC 339
W+ +PW R A D C+P + LC
Sbjct: 114 WFPNIPWDRQPFSALRDLCDPFLALC 139
>04_04_0005 +
22095107-22095210,22095347-22095431,22095553-22095623,
22096613-22096727,22096884-22096963,22097302-22097386,
22098081-22098175,22098298-22098348,22098866-22098946,
22099659-22099731,22100057-22100134,22100224-22100256
Length = 316
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 325 PVLLC-HGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKS 441
PV+ C HG S SF M EK + +DL G GKS
Sbjct: 75 PVVFCLHGGGYSGLSFALAASRMKEKARVVSMDLRGHGKS 114
>03_06_0497 - 34332310-34334415
Length = 701
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 364 WSRSLLGHGRAEPGDCSNRPKPPRTSGPKEPVCTILFL 251
WS L G GRA+ D + P+ P S PK+ + ++ L
Sbjct: 273 WSFRLGGGGRAQDLDLAKLPRLPSPSKPKKTLPPLIIL 310
>05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870
Length = 331
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 286 RMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFY-FIGIDLPGCGKSD 444
RM V G PPVLL HG ++R ++ + + Y + DL G G SD
Sbjct: 23 RMHVAEAGPPGAPPVLLLHGFPQVWYAWRHQMRALADAGYRAVAPDLRGYGDSD 76
>01_06_0985 - 33594588-33595451,33597655-33598518
Length = 575
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = -3
Query: 374 GRKLVAESARP---WQSRTGGLQQSPQATTHIRPQGTCMYHSFSN 249
G + AE RP W+ G Q+ HI+ G C + F N
Sbjct: 450 GNVVTAEVRRPLMLWRQPKGATQEEVLVVEHIQTDGVCKFDVFVN 494
>10_01_0202 +
2178297-2178406,2180725-2180980,2181838-2181912,
2182386-2182436,2182598-2182724,2182806-2182952,
2183846-2183976,2184088-2184189,2184604-2184702,
2185117-2185182,2185218-2185448
Length = 464
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 328 VLLCHGLADSATSFRPLI--KLMPEKFYFIGIDLPGCGKSD 444
V LCHG D+ T F I K+ + +D PG G S+
Sbjct: 191 VCLCHGYGDTCTFFLDGIARKIASAGYGVFALDYPGFGLSE 231
>12_02_1056 - 25728449-25728682,25728964-25729017
Length = 95
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 258 RMVHTGSLGPDVR-GGLGRLLQSPGSALPWPSRLR 359
R++ +L R GGLGRL + G WP+R R
Sbjct: 7 RLLAAAALAVAARHGGLGRLAEGVGDDYIWPARHR 41
>09_06_0145 + 21162308-21163666
Length = 452
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 345 PSRLRDQLPPSNQIDAREVLFYRHRPPGLRQVGPVPAGPDDQHIRSG 485
P R + PP + + R V +YR PP G V QH G
Sbjct: 187 PGMFRPRDPPLVEFEHRGVEYYRPPPPAAGVDGDVGGDHKQQHGHGG 233
>07_03_1003 +
23239829-23240121,23240257-23240349,23240785-23240993,
23241585-23241729,23241809-23241881,23242165-23242311,
23242411-23242536,23242653-23242712
Length = 381
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 322 PPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPP 456
P ++L HG ++ +R I ++ K IDL G G SD+ P
Sbjct: 117 PALVLIHGFGANSDHWRKNIPVLALKNRVYAIDLIGYGYSDKPNP 161
>04_01_0343 - 4481651-4482553,4485144-4485857
Length = 538
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 369 PPSNQIDAREVLFYRHRPPGLRQVGPVPA 455
PPS+ D F R PG R+V P+PA
Sbjct: 33 PPSDLFDTVLAAFLREVYPGGREVRPLPA 61
>03_01_0552 -
4115392-4115542,4115636-4115703,4115794-4115886,
4117564-4118238
Length = 328
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 307 GDCCNPPVLLCHGLADSAT-SFRPLIKLMPEKFYFIGIDLPGCGKS 441
G+ PP+LL HG AT +R + + F+ I DL G G S
Sbjct: 51 GEPLLPPLLLVHGFGPRATWQWRCQVGPLSRHFHLIVPDLIGFGGS 96
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 344 PWQSRTGGLQQSPQATTHIRPQGTCMYHSFSNKL 243
PW+ + G +++ + +I P+ +C++H S L
Sbjct: 31 PWKLKQRGSKEAVRKKVYICPEASCVHHDPSRAL 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,130,784
Number of Sequences: 37544
Number of extensions: 274397
Number of successful extensions: 882
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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