Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_G18
(431 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 112 2e-26
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 0.53
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 0.93
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 27 1.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 1.6
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 26 2.2
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 2.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 2.8
SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual 26 2.8
SPCC1795.03 |gms1||UDP-galactose transporter Gms1|Schizosaccharo... 25 3.8
SPBC13G1.02 |||mannose-1-phosphate guanyltransferase |Schizosacc... 25 5.0
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 25 5.0
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 25 6.6
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 25 6.6
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 24 8.7
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 24 8.7
SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr 2... 24 8.7
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 112 bits (270), Expect = 2e-26
Identities = 56/120 (46%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = +3
Query: 66 PXWGLLPKKETGVVSFLNKYPVYDGRDTIIAIFDSGVDPAAEGLKVTSTGETKVIERFDC 245
P G++PK ET FL K+P YDGR + I D+GVDP A GL VT+TG K DC
Sbjct: 68 PVDGVVPKHETQAYEFLKKFPEYDGRGVTVGILDTGVDPGAPGLSVTTTGLPKFKNIVDC 127
Query: 246 SGCGDVDTSKTVKAVDG----YITGVTGRRLKIPETWNNPNGDWRVGVLHPYSIYPTKSR 413
+G GDVDTS V A D ITG +GR LK+ + W NP+ W+VG Y +P R
Sbjct: 128 TGAGDVDTSVEVAAADSNDYLTITGRSGRTLKLSKEWKNPSKKWKVGCKLAYEFFPKDLR 187
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 0.53
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 292 STALTVLLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAIIVSLPS*TGYLFR 113
ST T + S S LQ++ S+ SP++ + + + STP +I S S T L
Sbjct: 538 STPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIP 597
Query: 112 NDTTPVS 92
+ +T S
Sbjct: 598 SSSTDYS 604
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.5 bits (58), Expect = 0.93
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 87 KKETGVVSFLNKYPVYDGRDTIIAIFDSGVDPAAEGLKVTSTGETKVIERFDCSGCGDVD 266
K++ G + +N+ P + G+ T+ + S ++EG TST E++ E D S D +
Sbjct: 650 KRDFGDTNAINR-PKFVGQQTLEEFYASETSESSEGEYETSTSESEDEETDDTSQEEDNE 708
Query: 267 TSKT 278
+ T
Sbjct: 709 KNST 712
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 1.2
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -2
Query: 310 TPVMYPSTALTVLLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAIIVS 143
TPV P+ A++V +STSP SN + SP + + + A +P +A VS
Sbjct: 156 TPVREPTKAISVASMSTSP----SNYASRASSPDMKSSAAVTANVSPIQNVAQHVS 207
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 1.6
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -2
Query: 325 SLRPVTP--VMYPSTALTVLLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAI 152
S P+T V+ ST++T V S P+ S+ + +P+ T S STP + ++
Sbjct: 2408 SSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPI--TSSTVVNSSTPITSSSV 2465
Query: 151 IVSLPS*TGYLFRNDTTPVS 92
+ S T N +TP++
Sbjct: 2466 LNSSTPITSSTALNTSTPIT 2485
Score = 25.0 bits (52), Expect = 5.0
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -2
Query: 325 SLRPVTP--VMYPSTALTVLLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAI 152
S P+T V+ ST +T + P+ S S S +T S STP + ++
Sbjct: 3056 SSTPITSSSVLNSSTPITSSTALNTSTPITS--SSVLNSSTAITSSSIVNSSTPITSSSV 3113
Query: 151 IVSLPS*TGYLFRNDTTPVS 92
+ S + T N +TP++
Sbjct: 3114 LNSSTAITSSSILNSSTPIT 3133
Score = 24.6 bits (51), Expect = 6.6
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -2
Query: 295 PSTALTVLLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAIIVSLPS*TGYLF 116
P T+ T L ST P+ S S S +T S + STP + +++ S + T
Sbjct: 3299 PITSSTTLNTST---PITS--SSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSI 3353
Query: 115 RNDTTPVS 92
N +TPV+
Sbjct: 3354 LNSSTPVT 3361
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 26.2 bits (55), Expect = 2.2
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 159 IFDSGVDPAAEGLKVTSTGETKVIERFDCSGCGDVDTSKTVKAVDGYITGVTGRRL 326
IFD+ ++PA L TS+G + ++ + S + + K D + TGR+L
Sbjct: 92 IFDAKINPALFDLSSTSSGSIEHVDHQNISLEASLAEEEERKKGDAKKSEATGRQL 147
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.8 bits (54), Expect = 2.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 87 KKETGVVSFLNKYPVYDGRDTIIAIFDSGVD 179
KK TG++ L K PV +G I G+D
Sbjct: 2454 KKSTGLLESLCKVPVVNGISAPALILQQGID 2484
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 2.8
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Frame = -2
Query: 310 TPVMYPSTALTVLLVSTSPHPLQSNLSMTFVS----PVLVTLSPSA--AGSTPESKI-AI 152
TP+ S+A + STS PL S S T S P+ S +A A STP + + +
Sbjct: 322 TPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNST 381
Query: 151 IVSLPS*TGYLFRNDTTPVSFFGNNPQXGEITVXSGTSAIFDDPI 17
+ S T N TT S P +V TS++ P+
Sbjct: 382 SATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLP-TSSVSSTPL 425
>SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual
Length = 231
Score = 25.8 bits (54), Expect = 2.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 359 GLACRCSPSIQHLPDKVKXRIQE 427
GL CS I+HLP KVK +Q+
Sbjct: 163 GLHKNCS-EIEHLPSKVKSELQQ 184
>SPCC1795.03 |gms1||UDP-galactose transporter
Gms1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 25.4 bits (53), Expect = 3.8
Identities = 12/45 (26%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -2
Query: 292 STALTVLLVS-TSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPESK 161
ST++++++ S S + + +S+TF+ V++ ++ + + PESK
Sbjct: 284 STSISIIISSLASVYLMDFKISLTFLIGVMLVIAATFLYTKPESK 328
>SPBC13G1.02 |||mannose-1-phosphate guanyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 414
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -2
Query: 250 PLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAIIVSLPS*TGYLFRNDTTPVSFFGN 80
PLQ L++ LVTL + S +V PS TG + P S+ N
Sbjct: 124 PLQELLNVHHEKKALVTLMATKVSKEDASNFGCLVEEPS-TGRVLHYVDKPSSYLSN 179
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 25.0 bits (52), Expect = 5.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -2
Query: 370 TRQSPFGLFHVSGIFSLRPVTPVMYPSTALTVLLVSTSPHPLQSNLSMTFVSPVL 206
T +PF + + I +P TP M+ ++A LL S L S L + F P L
Sbjct: 334 TTSAPFQVRDIQKIVPRKPATPTMFSASADRQLL-SEDEQALCSKLQI-FPKPFL 386
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 24.6 bits (51), Expect = 6.6
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = -2
Query: 253 HPLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAIIVSLPS*TGYLFRNDTTPV 95
HP + + T ++++ + S PE ++ PS +++ N+T P+
Sbjct: 471 HPKKVFMRETITRELILSYYTRISDSLPEELRCLLGEQPSGPNFVYENETHPL 523
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 24.6 bits (51), Expect = 6.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 254 ASAAVKPFYDLRFTSTSHLKSFGRRIDARIENSYYRISAIVNRIFIQKRY 105
A A+K F+D+R S S L+ F + + ++ N I I+K Y
Sbjct: 278 AVLAIKKFFDVRVDSLSQLE-FPEQFWLELTAESSLLARTFNEICIEKNY 326
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 24.2 bits (50), Expect = 8.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 199 LSPSAAGSTPESKIAIIVSLPS*TGYLFRNDTTPVS 92
LSP T ++ I LPS + + R D+TP+S
Sbjct: 436 LSPIPPVHTTHGLVSDIRPLPSVSSPIMRADSTPIS 471
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 217 SPVLVTLSPSAAGSTPESKI 158
SP L +LSP A +TP S+I
Sbjct: 94 SPSLRSLSPPATPATPRSRI 113
>SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 518
Score = 24.2 bits (50), Expect = 8.7
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -2
Query: 382 WRTPTRQSPFGLFHVSGIFSLRPVTPVMYPSTALTVLLVS-TSPHPLQSNLSMTF--VSP 212
W TP + + S + L VT YPS+ + L H + ++T+ V P
Sbjct: 23 WATPKQSQIKRPYTASTVAVLSEVTKAYYPSSQQALKLYDLLREHRNKGTATLTYGVVDP 82
Query: 211 VLVTLSPSAAGST 173
VL + + A T
Sbjct: 83 VLASQASKAGLET 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,852,529
Number of Sequences: 5004
Number of extensions: 37562
Number of successful extensions: 124
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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