Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_G18
(431 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 105 2e-23
08_01_0541 + 4702930-4703328,4703411-4703506,4703601-4703649,470... 32 0.17
01_01_0880 + 6903535-6903932,6904931-6905022,6905601-6905680,690... 30 0.70
01_01_0261 + 2119519-2121033 30 0.92
10_06_0130 - 11055305-11055593,11055666-11055949,11057271-110573... 29 1.2
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 29 1.6
04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,174... 29 2.1
03_03_0220 - 15550944-15551090,15551169-15551219,15551364-155515... 29 2.1
10_08_0476 + 18186127-18186277,18186380-18186627,18186713-18187108 28 2.8
09_06_0037 + 20389976-20391016,20391103-20391723 28 3.7
09_04_0751 + 19927164-19927835,19927926-19928663 28 3.7
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 28 3.7
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758 27 4.9
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 27 4.9
01_06_1151 + 34937738-34937855,34937959-34939244 27 4.9
09_06_0182 - 21397221-21397575,21397712-21398076,21398510-213986... 27 6.5
10_02_0071 + 4928899-4929465 27 8.6
05_07_0017 + 27070332-27071886,27072238-27072344,27072427-27072531 27 8.6
04_03_0314 - 14238620-14240128 27 8.6
>02_05_0226 +
26971851-26972034,26972734-26972834,26972876-26972978,
26973335-26973477,26973525-26973605,26973929-26974015,
26974097-26974239,26974746-26974896,26974973-26975095,
26975362-26975445,26975531-26975718,26976726-26976900,
26977008-26977129,26977231-26977310,26977532-26977590,
26977921-26978075,26978680-26978858,26980050-26980162,
26980243-26980413,26980552-26980680,26980756-26980856,
26980942-26981059,26981739-26981818,26983230-26983302,
26983865-26983950,26984025-26984076,26984221-26984352,
26984560-26984628,26984912-26985004,26985806-26985901,
26986710-26986808,26986894-26986986,26987459-26987608,
26988391-26988549
Length = 1323
Score = 105 bits (252), Expect = 2e-23
Identities = 60/125 (48%), Positives = 74/125 (59%), Gaps = 18/125 (14%)
Frame = +3
Query: 78 LLPKKETGVVSFLNKYPVYDGRDTIIAIFDSGVDPAAEGLKVTSTGETKVIERFD----- 242
L+PKKE GV FL +P YDGR +IAIFDSGVDPAA GL+ TS G+ K+++ D
Sbjct: 33 LMPKKEIGVDRFLAAHPEYDGRGALIAIFDSGVDPAAAGLQTTSDGKPKILDVIDWCCNP 92
Query: 243 -----------CS-GCGDVDTSKTVKA-VDGYITGVTGRRLKIPETWNNPNGDWRVGVLH 383
CS G GDVDTSK VKA DG I G +G L I +W NP+ +W VG
Sbjct: 93 SEIPIHIHVFKCSTGSGDVDTSKVVKADDDGSIVGASGTHLTINPSWKNPSQEWHVGCKL 152
Query: 384 PYSIY 398
Y ++
Sbjct: 153 VYELF 157
>08_01_0541 +
4702930-4703328,4703411-4703506,4703601-4703649,
4703771-4703865
Length = 212
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = -1
Query: 254 ASAAVKPFYDLRFTSTSHLKSFGRRIDARIENSYYRISAIVNRI 123
ASA+V DLR + SHL S RR+DA +S + A +RI
Sbjct: 85 ASASVSTVADLRILAASHLDSLKRRLDALHGDSARDLEASHSRI 128
>01_01_0880 +
6903535-6903932,6904931-6905022,6905601-6905680,
6905885-6905926,6906001-6906128,6906530-6906710,
6906801-6906979,6907469-6907717,6907950-6908193
Length = 530
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 295 PSTALTVLLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPES 164
PS + + S SP P +L++ + P+ + S SAA ++PES
Sbjct: 30 PSPSPSPTSASPSPSPPAPHLAVPLILPITSSSSASAAAASPES 73
>01_01_0261 + 2119519-2121033
Length = 504
Score = 29.9 bits (64), Expect = 0.92
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 307 PVMYPSTALTVLLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTPESKIAI 152
P++ P L +LL + SP P+ LS SP L T + A S ++ A+
Sbjct: 4 PILLPLLLLLLLLAAASPRPV---LSRRHASPPLATETLDVAASLSRARAAV 52
>10_06_0130 -
11055305-11055593,11055666-11055949,11057271-11057398,
11058522-11058606,11058917-11060872
Length = 913
Score = 29.5 bits (63), Expect = 1.2
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Frame = -2
Query: 373 PTRQSPFGLFHVSGIFSLRPVTP---------VMYPSTALTVLLVSTSPHPLQSNLSMTF 221
P +PF L + + RP+TP + P+T+L +L S HP S+L
Sbjct: 22 PELLTPFDLSRLRATLASRPLTPRRLGRLLALPLSPATSLLLLTWYASSHPALSSL---- 77
Query: 220 VSPVLVTLSPSAAGSTPESKIAIIVSLP 137
L P AG P+ ++++ SLP
Sbjct: 78 ------PLRPLLAGGDPDRALSLLDSLP 99
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 307 PVMYPSTALTVLLVST-SPHPLQSNLSMTFVSPVLVTLSPSAAGSTPE 167
PV PST TV L + +P P+ ++++ T V P T +A +TPE
Sbjct: 317 PVKPPSTPNTVALAANMAPDPVTTSVT-TSVIPAAQTKKKKSAAATPE 363
>04_01_0150 +
1741639-1741742,1742432-1742543,1742856-1743594,
1743724-1743776,1743914-1743991,1744107-1744405,
1744660-1745476,1745576-1745842,1745987-1746181,
1746287-1746372,1746469-1746657,1747138-1747207,
1747399-1747552,1747706-1747832,1749158-1749254
Length = 1128
Score = 28.7 bits (61), Expect = 2.1
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -2
Query: 379 RTPTRQSPFGLFHVSGIFSLRPVTPVMYPSTALTVLLVSTSPHPLQSNLSMTFVSPVLVT 200
RTPT Q H+ G+ S + PS+ T+ T P P+ + V+ VT
Sbjct: 486 RTPTPQQESHGCHLLGVPSSCFSPKALQPSSTNTIEECFT-PSPVTQTVQPIQVASPHVT 544
Query: 199 LSPSAAG--STPESKIAIIVS 143
SPSA G S P+ +A +VS
Sbjct: 545 -SPSAYGKSSVPKPSVARVVS 564
>03_03_0220 -
15550944-15551090,15551169-15551219,15551364-15551554,
15551625-15551925,15552050-15552240,15553283-15553357,
15555584-15555707
Length = 359
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 300 ITGVTGRRLKIPETWNNPNGDWRVGVLHPYSIYPTKSRXGSKSP 431
+T + +++PE ++N G ++V + PY +P + S SP
Sbjct: 293 LTPIATTSIRMPEQYDNFMGHFQVPMTQPYMFWPHYNSVPSASP 336
>10_08_0476 + 18186127-18186277,18186380-18186627,18186713-18187108
Length = 264
Score = 28.3 bits (60), Expect = 2.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 284 GSRWVHHWCYW 316
G RW HHW YW
Sbjct: 215 GWRWRHHWVYW 225
>09_06_0037 + 20389976-20391016,20391103-20391723
Length = 553
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 429 GSWILSLTLSGKCCMDGE 376
GSW+L L+L+ KC DG+
Sbjct: 8 GSWLLYLSLAAKCSGDGD 25
>09_04_0751 + 19927164-19927835,19927926-19928663
Length = 469
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -1
Query: 314 SNTSDVPIYC---LNSFACVDISASAAVKPFYDLRFTSTSHLKSFGR 183
+NT D P Y +N F +D++ V FY+L+ H+ S R
Sbjct: 188 ANTEDSPAYLDLLVNQFKGLDMADHVLVNSFYELQPQEAEHMASAWR 234
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 27.9 bits (59), Expect = 3.7
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -1
Query: 284 LNSFACVDISASAAVKPFYDLRFTSTSHLKSFGRRIDARIENSYYRISAIVNR 126
L F D S + F DLR +TS + FG A I + +RISAI NR
Sbjct: 37 LARFPSGDFLLSQSPISFDDLRH-ATSQVGDFGADNRAGISRTLHRISAIRNR 88
>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
Length = 223
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -1
Query: 254 ASAAVKPFYDLRFTSTSHLKSFGRRIDARIENSYYRISAIVNR 126
ASAAV DLR ++ S +++ RR+D ++ + A ++R
Sbjct: 112 ASAAVSSVGDLRSSAASQMEALKRRLDELHSRAHTDLDASLSR 154
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 54 TVISPXWGLLPKKETGVVSFLNKYPVYDGRDTIIAIFD 167
T+I P LP+K +F +P+Y +D I + D
Sbjct: 209 TIIPPQTAFLPQKPHATFNFTLNFPIYKVQDRIDELKD 246
>01_06_1151 + 34937738-34937855,34937959-34939244
Length = 467
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 177 DPAAEGLKVTSTGETKVIERFDCSGCGDVDTSKTVKAVDGYITGVTGRRLKI 332
D +E L++ + R +C GCG+ + K A +G T R KI
Sbjct: 352 DKCSEILQLPAAVSANRAARLECGGCGETLSIKLPAAAAAAASGSTDRPKKI 403
>09_06_0182 -
21397221-21397575,21397712-21398076,21398510-21398685,
21398802-21399039,21399627-21400118
Length = 541
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +2
Query: 287 SRWVHHWCYWT*TKDTRNMEQSEWGLACRCSPSIQHLPDKVKXRIQE 427
+++V + W + M E + CS S+ LPDK +++E
Sbjct: 307 AKFVESYYKWALPMEKHGMVPDEDFMEAMCSCSVMKLPDKFYDKVEE 353
>10_02_0071 + 4928899-4929465
Length = 188
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 274 LLVSTSPHPLQSNLSMTFVSPVLVTLSPSAAGSTP 170
+L STSPH Q L SP + SP+AA S+P
Sbjct: 156 ILASTSPHLRQPRL-----SPPAPSTSPAAASSSP 185
>05_07_0017 + 27070332-27071886,27072238-27072344,27072427-27072531
Length = 588
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 186 AEGLKVTSTGETKVIERFDCSGCGDVDTSKTVKAVDGYITGVTGRRLKIPETWN 347
A GLK + + + + C + +VKA G + V +RLK+P +W+
Sbjct: 471 AHGLKFSQSKIDYHDSKIEDMACKYANPPVSVKADFGAVMDVLKKRLKVPCSWH 524
>04_03_0314 - 14238620-14240128
Length = 502
Score = 26.6 bits (56), Expect = 8.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 319 RPVTPVMYPSTALTVLLVSTSPHPLQSNLSMTFV--SPVLVTLSPSAAGSTPESKIA 155
RP+ P + AL L + + HPL NLS V +P L+ A S++A
Sbjct: 123 RPLVPFVLRYPALFRLFQAPTSHPLSPNLSTLAVALTPAAEALAADLAALRGSSELA 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,765
Number of Sequences: 37544
Number of extensions: 237422
Number of successful extensions: 747
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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