Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_G15
(429 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 101 8e-22
BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 101 8e-22
BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 101 8e-22
BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 101 8e-22
AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 101 8e-22
AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 64 3e-10
L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein. 30 3.8
AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation ... 30 3.8
AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial translati... 30 3.8
M83363-1|AAA36455.1| 1170|Homo sapiens plasma membrane calcium A... 29 5.1
M25874-1|AAA50819.1| 1205|Homo sapiens calcium ATPase (hPMCA4) p... 29 5.1
BX537444-1|CAD97686.1| 1205|Homo sapiens hypothetical protein pr... 29 5.1
BC150293-1|AAI50294.1| 1164|Homo sapiens ATP2B4 protein protein. 29 5.1
AL513343-3|CAI17026.1| 1205|Homo sapiens ATPase, Ca++ transporti... 29 5.1
AL513343-2|CAI17025.1| 1170|Homo sapiens ATPase, Ca++ transporti... 29 5.1
>CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein.
Length = 105
Score = 101 bits (243), Expect = 8e-22
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +1
Query: 190 DLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 363
D++REV G A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 42 DMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 48 FEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFV 185
+ +AVGL KGHK TK + R +R +G TKH+KFV
Sbjct: 5 YPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFV 40
>BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 101 bits (243), Expect = 8e-22
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +1
Query: 190 DLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 363
D++REV G A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 42 DMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 48 FEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFV 185
+ +AVGL KGHK TK + R +R +G TKH+KFV
Sbjct: 5 YPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFV 40
>BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 101 bits (243), Expect = 8e-22
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +1
Query: 190 DLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 363
D++REV G A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 42 DMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 48 FEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFV 185
+ +AVGL KGHK TK + R +R +G TKH+KFV
Sbjct: 5 YPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFV 40
>BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 101 bits (243), Expect = 8e-22
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +1
Query: 190 DLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 363
D++REV G A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 42 DMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 48 FEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFV 185
+ +AVGL KGHK TK + R +R +G TKH+KFV
Sbjct: 5 YPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFV 40
>AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 101 bits (243), Expect = 8e-22
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +1
Query: 190 DLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 363
D++REV G A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 42 DMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 48 FEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFV 185
+ +AVGL KGHK TK + R +R +G TKH+KFV
Sbjct: 5 YPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFV 40
>AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36
protein.
Length = 32
Score = 63.7 bits (148), Expect = 3e-10
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +1
Query: 247 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 342
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein.
Length = 727
Score = 29.9 bits (64), Expect = 3.8
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 133 ELGQLD*RVF--KRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTH 306
E GQ D ++ KR + RE GH ++KR++ L+FL+R+
Sbjct: 454 EKGQEDLKIIEEKRKEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIP 502
Query: 307 IRAKRKREELSNVLAQMRK 363
++ K KRE SNVL+ + K
Sbjct: 503 LKPKEKRERDSNVLSVIIK 521
>AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation
factor 2 protein.
Length = 727
Score = 29.9 bits (64), Expect = 3.8
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 133 ELGQLD*RVF--KRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTH 306
E GQ D ++ KR + RE GH ++KR++ L+FL+R+
Sbjct: 454 EKGQEDLKIIEEKRKEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIP 502
Query: 307 IRAKRKREELSNVLAQMRK 363
++ K KRE SNVL+ + K
Sbjct: 503 LKPKEKRERDSNVLSVIIK 521
>AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial
translation-initiation factor 2 protein.
Length = 727
Score = 29.9 bits (64), Expect = 3.8
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 133 ELGQLD*RVF--KRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTH 306
E GQ D ++ KR + RE GH ++KR++ L+FL+R+
Sbjct: 454 EKGQEDLKIIEEKRKEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIP 502
Query: 307 IRAKRKREELSNVLAQMRK 363
++ K KRE SNVL+ + K
Sbjct: 503 LKPKEKRERDSNVLSVIIK 521
>M83363-1|AAA36455.1| 1170|Homo sapiens plasma membrane calcium ATPase
protein.
Length = 1170
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 121 TKPSELGQLD*RVFKRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDK 267
T+P L R + RN P +S +++ ++GHA Y+ + +L + +K
Sbjct: 892 TEPPTESLLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEK 940
>M25874-1|AAA50819.1| 1205|Homo sapiens calcium ATPase (hPMCA4)
precursor protein.
Length = 1205
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 121 TKPSELGQLD*RVFKRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDK 267
T+P L R + RN P +S +++ ++GHA Y+ + +L + +K
Sbjct: 892 TEPPTESLLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEK 940
>BX537444-1|CAD97686.1| 1205|Homo sapiens hypothetical protein
protein.
Length = 1205
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 121 TKPSELGQLD*RVFKRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDK 267
T+P L R + RN P +S +++ ++GHA Y+ + +L + +K
Sbjct: 892 TEPPTESLLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEK 940
>BC150293-1|AAI50294.1| 1164|Homo sapiens ATP2B4 protein protein.
Length = 1164
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 121 TKPSELGQLD*RVFKRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDK 267
T+P L R + RN P +S +++ ++GHA Y+ + +L + +K
Sbjct: 892 TEPPTESLLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEK 940
>AL513343-3|CAI17026.1| 1205|Homo sapiens ATPase, Ca++ transporting,
plasma membrane 4 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 121 TKPSELGQLD*RVFKRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDK 267
T+P L R + RN P +S +++ ++GHA Y+ + +L + +K
Sbjct: 892 TEPPTESLLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEK 940
>AL513343-2|CAI17025.1| 1170|Homo sapiens ATPase, Ca++ transporting,
plasma membrane 4 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 121 TKPSELGQLD*RVFKRNTPSLSXDLVREVVGHAQYEKRAMELLKVSKDK 267
T+P L R + RN P +S +++ ++GHA Y+ + +L + +K
Sbjct: 892 TEPPTESLLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEK 940
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,503,681
Number of Sequences: 237096
Number of extensions: 903693
Number of successful extensions: 1903
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1898
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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