Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_G14
         (402 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-6|CAB02104.1|  192|Caenorhabditis elegans Hypothetical pr...    62   1e-10
AF169201-2|AAF01679.1|  192|Caenorhabditis elegans CPN-1 protein.      62   1e-10
AF040641-1|AAB94947.2|  203|Caenorhabditis elegans Calponin prot...    54   3e-08
AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin prot...    53   7e-08
U97013-5|AAB52338.1|  142|Caenorhabditis elegans Calponin protei...    52   2e-07
U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical pr...    39   0.001
U23520-5|AAC46554.4|  975|Caenorhabditis elegans Mammalian vav (...    31   0.31 
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (...    31   0.31 
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.      31   0.31 
Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical pr...    28   2.2  
AF016679-6|AAB66156.1|  490|Caenorhabditis elegans Hypothetical ...    28   2.2  
Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z27079-7|CAA81592.1|  293|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U88170-3|AAB42247.1|  338|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U50193-7|AAL11479.1|  327|Caenorhabditis elegans T box family pr...    27   6.7  
AF016679-5|AAB66157.1|  485|Caenorhabditis elegans Hypothetical ...    27   6.7  
AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical ...    27   6.7  
AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical pr...    26   8.8  

>Z79755-6|CAB02104.1|  192|Caenorhabditis elegans Hypothetical
           protein F43G9.9 protein.
          Length = 192

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = +2

Query: 26  ASSQHSEKALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPP---GELFE 196
           ASS  +EK+      ++LE Q   KI  K +     E  +W++ V G  F      +   
Sbjct: 5   ASSDRAEKS-----GIALEAQ--QKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLV 57

Query: 197 DVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAY 337
            V +DG++LC L N LKPGSV K+NT+   FK MENI+ F    + Y
Sbjct: 58  KVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY 104


>AF169201-2|AAF01679.1|  192|Caenorhabditis elegans CPN-1 protein.
          Length = 192

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = +2

Query: 26  ASSQHSEKALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPP---GELFE 196
           ASS  +EK+      ++LE Q   KI  K +     E  +W++ V G  F      +   
Sbjct: 5   ASSDRAEKS-----GIALEAQ--QKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLV 57

Query: 197 DVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAY 337
            V +DG++LC L N LKPGSV K+NT+   FK MENI+ F    + Y
Sbjct: 58  KVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY 104


>AF040641-1|AAB94947.2|  203|Caenorhabditis elegans Calponin protein
           2 protein.
          Length = 203

 Score = 54.4 bits (125), Expect = 3e-08
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
 Frame = +2

Query: 77  LERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP----PGELFEDV---LKDGTVLCQLI 235
           L R+++ K  ++   E+  E  +WIE V G +F       E   DV   LKDG +LC+LI
Sbjct: 10  LSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKLI 69

Query: 236 NKLKPGSVPKINTTGGQ-FKMMENITNFQSAIKAYGVPTSMC 358
            KL P      N      F MMENI+NF +A K +GV    C
Sbjct: 70  EKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISC 111


>AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin protein
           4 protein.
          Length = 154

 Score = 53.2 bits (122), Expect = 7e-08
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +2

Query: 98  KIASKRNPEKEKEAQEWIEGVLGAKFP---PGELFEDVLKDGTVLCQLINKLKPGSVPKI 268
           K ASK N  +     EWI  +    F      + F + LKDG  LC+L+N +K GSV KI
Sbjct: 20  KQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKLVNAIKAGSVKKI 79

Query: 269 NTTGGQFKMMENITNFQSAIKAYGV 343
                 F  +ENI  F +A ++ GV
Sbjct: 80  MKPISNFNCLENINQFSTAARSLGV 104


>U97013-5|AAB52338.1|  142|Caenorhabditis elegans Calponin protein 3
           protein.
          Length = 142

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +2

Query: 89  VRAKIASKRNPEKEKEAQEWIEGVLGAKFPP-GEL--FEDVLKDGTVLCQLINKLKPGSV 259
           VR K  SK   ++     EWI+ + G      GE   F ++LKDGT+LC+  N ++ GS+
Sbjct: 14  VRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCKAANGIEAGSI 73

Query: 260 PKINTTGGQFKMMENITNFQSAIKAYGVP 346
            K+      F  MENI  F    K  GVP
Sbjct: 74  KKVQKPISTFACMENINAFVEFAKKQGVP 102


>U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical
           protein C14F11.2 protein.
          Length = 638

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
 Frame = +2

Query: 26  ASSQHSEKALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP--PGEL-FE 196
           A+ + + K +T S     +  +RA      N  +   A++ +   LG  F    G++ F 
Sbjct: 488 AAQKIASKPITSSVTNLNKSGLRAPATGIANDVES--ARKLMREKLGPTFSLNKGDISFS 545

Query: 197 DVLKDGTVLCQLINKLKPGSVPKINTTGGQF---KMMENITNFQSAIKAYGVP-TSMCSK 364
             L DG  LC+ INKL P S+   ++T       +   N+  F    +  GVP T++CS+
Sbjct: 546 LQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQ 605

Query: 365 PXIYGKK 385
             I  K+
Sbjct: 606 MDIISKR 612


>U23520-5|AAC46554.4|  975|Caenorhabditis elegans Mammalian vav
           (oncogene) relatedprotein 1, isoform a protein.
          Length = 975

 Score = 31.1 bits (67), Expect = 0.31
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +2

Query: 191 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY 337
           F  VL+DG +LC+L N L P  +   KI  T     F    NI  F    K Y
Sbjct: 32  FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTY 84


>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
           (oncogene) relatedprotein 1, isoform b protein.
          Length = 1007

 Score = 31.1 bits (67), Expect = 0.31
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +2

Query: 191 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY 337
           F  VL+DG +LC+L N L P  +   KI  T     F    NI  F    K Y
Sbjct: 64  FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTY 116


>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
          Length = 1007

 Score = 31.1 bits (67), Expect = 0.31
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +2

Query: 191 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY 337
           F  VL+DG +LC+L N L P  +   KI  T     F    NI  F    K Y
Sbjct: 64  FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTY 116


>Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical
           protein W02D9.3 protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  RAKIASKRNPEKEKEAQEWIE 154
           RAK+  K+ PEKEKEA  +I+
Sbjct: 103 RAKMVYKKKPEKEKEAVPFID 123


>AF016679-6|AAB66156.1|  490|Caenorhabditis elegans Hypothetical
           protein T28C12.1 protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -1

Query: 180 GGNLAPRTPSIHSWASFSFSGLRLEAIL 97
           GG+LAP   SI S A F +SG R   +L
Sbjct: 427 GGSLAPVIASISSTAIFKYSGYRYVIVL 454


>Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical
           protein C25F9.5 protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 15/65 (23%), Positives = 33/65 (50%)
 Frame = -3

Query: 376 IDXRFGTHRCRYTICFNCRLEVCDVLHHFELSTGGVDLGDRARLQLVDELAKNSAVLEDI 197
           +D  +    C++   F  R E+ D++  ++ S   +DL + A + L+  +     +L+D+
Sbjct: 487 VDVNWNHTACKHDSFFITRDEMDDIVDRWKKS---IDLTENAHIDLIRNVLIEKKLLQDL 543

Query: 196 LK*FT 182
           L  +T
Sbjct: 544 LPTYT 548


>Z27079-7|CAA81592.1|  293|Caenorhabditis elegans Hypothetical
           protein T05G5.7 protein.
          Length = 293

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 369 YGLEHIDVGTPYALIADWKFVMFSIILNCPP 277
           YGLE +D+     L A W  +MF ++++  P
Sbjct: 133 YGLEAMDLDPSSFLAAKWTAIMFGLVVDQLP 163


>U88170-3|AAB42247.1|  338|Caenorhabditis elegans Hypothetical
           protein C10G11.7 protein.
          Length = 338

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 191 FEDVLKDGTVLCQLINKLKPGSV 259
           F    KDG VL +L N L+PG+V
Sbjct: 157 FIGFFKDGDVLAKLANALEPGAV 179


>U50193-7|AAL11479.1|  327|Caenorhabditis elegans T box family
           protein 7 protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 280 WTVQNDGEHHKLPVC 324
           W V   GEHH LP C
Sbjct: 123 WIVAGVGEHHPLPTC 137


>AF016679-5|AAB66157.1|  485|Caenorhabditis elegans Hypothetical
           protein T28C12.2 protein.
          Length = 485

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 186 SPGGNLAPRTPSIHSWASFSFSGLRLEAIL 97
           S GG++AP   SI S A F ++G R   +L
Sbjct: 421 SLGGSIAPVIASISSTAIFKYTGYRYVIVL 450


>AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2b protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  QHSEKALTQSHNMSL-ERQVRAKIASKRNPEKEKE 136
           Q  E+A  +  N    E ++RAK+ +K+  E+EKE
Sbjct: 470 QEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKE 504


>AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2a protein.
          Length = 772

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  QHSEKALTQSHNMSL-ERQVRAKIASKRNPEKEKE 136
           Q  E+A  +  N    E ++RAK+ +K+  E+EKE
Sbjct: 470 QEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKE 504


>Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical
           protein K02B9.2 protein.
          Length = 819

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 231 SWQRTVPSLRTSSNSSPGGNLAPRTPSIHSWASFSFS 121
           S Q  VP +     +    N++   PS+  W  +SFS
Sbjct: 141 SHQNQVPGVDRDEYAGDRSNVSINLPSVDQWREYSFS 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,123,835
Number of Sequences: 27780
Number of extensions: 221277
Number of successful extensions: 803
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)