Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_G10
         (573 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0398 + 3092577-3093857                                          101   5e-22
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590...    29   3.5  
06_01_0746 + 5580755-5582119                                           27   8.0  
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426...    27   8.0  
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497...    27   8.0  

>03_01_0398 + 3092577-3093857
          Length = 426

 Score =  101 bits (241), Expect = 5e-22
 Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
 Frame = +3

Query: 102 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDV 281
           V+NF AGPA LP  V +  + EL ++  SG+S++E SHR   +     + +  +R LL V
Sbjct: 65  VYNFAAGPATLPLSVLQRAQAELVDYRGSGMSIMEMSHRGKEFDAAIKKAEADLRALLAV 124

Query: 282 PDNYKVXXXXXXXXXXXXXVPLNL-ISRTGTADYVVTGAWSAKAAXGGEKI------WES 440
           PD ++V              PLNL  S +  AD+VV+G+WS KA    +K       W  
Sbjct: 125 PDTHEVLFLQGGATSQFAAAPLNLCASPSDPADFVVSGSWSDKAFKEAKKFSAASVAWSG 184

Query: 441 KFGATTDR*I*RHT*SDKMELDPNASYVHICTNETIHGVEFDSF 572
           K G  T          D +E +P A ++HIC+NETIHGVEF  +
Sbjct: 185 KDGKYTSL-----PPFDAIEQNPEARFLHICSNETIHGVEFKDY 223


>04_04_0827 -
           28457858-28458028,28458513-28458669,28458984-28459083,
           28459204-28459231,28459321-28459396,28461276-28461355,
           28461642-28461805,28461897-28462056,28462154-28462277,
           28462901-28463941,28464141-28464259,28464512-28464823,
           28465222-28465425,28466068-28466751,28467301-28467474
          Length = 1197

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 534 YKYVHMKHWDQVPFCLIRYVFIFIC 460
           Y YVH++  D V + L++Y+F+  C
Sbjct: 280 YLYVHLRDADSVHYGLLKYLFVRSC 304


>06_01_0746 + 5580755-5582119
          Length = 454

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 87  VKMSKVFNFGAGPAKLPEEVYEIIKNELTN 176
           ++ S + + GA    LPE+VYE +K E  +
Sbjct: 317 LRSSTIIDSGASITTLPEDVYEAVKAEFVS 346


>06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,
            4263151-4263315,4263416-4263544,4263758-4263858,
            4264527-4264596,4265080-4265331,4265828-4265897,
            4266281-4266341,4266916-4267003,4267746-4267830,
            4268168-4268234,4268442-4268559,4268843-4268923,
            4269022-4269267,4269670-4269771,4269847-4269914,
            4270040-4270171,4270283-4270430,4270504-4270790,
            4270920-4271067,4271156-4271331,4271407-4271518,
            4271614-4271667,4273134-4273244,4273317-4273478,
            4273627-4273814,4273948-4274137,4274297-4274464,
            4274832-4274912
          Length = 1359

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +3

Query: 87   VKMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLN 242
            +K SK+       A +  +   +++N ++  E  G+++L  +HR ST MK++
Sbjct: 1273 LKSSKILCLDECTANVDNQTASLLQNTISA-ECKGMTVLTIAHRISTVMKMD 1323


>02_03_0390 + 18448671-18448889,18449567-18449632,18449702-18449761,
            18449864-18449959,18452287-18452447,18452669-18452790,
            18452872-18453239,18453653-18453739,18453835-18453969,
            18454349-18454471,18454771-18454854,18455023-18455187,
            18455310-18455486,18455660-18455773,18455912-18456016,
            18457056-18457174,18457244-18457385,18457461-18457555,
            18457757-18457862,18458125-18458204,18458285-18458461,
            18459828-18459912,18460024-18460104,18460208-18460351,
            18460468-18460563,18460654-18460854,18461462-18461895,
            18462417-18462478,18462622-18462872,18462956-18463030,
            18463110-18463300,18463696-18463867,18463956-18464020,
            18464646-18464778,18464861-18464962,18465047-18465130,
            18465656-18465730,18465818-18465877,18465967-18466223,
            18466560-18466608,18466781-18466941,18467013-18467079,
            18467174-18467299,18467422-18467592,18468566-18468769,
            18469059-18469165,18469608-18469737,18469774-18469959,
            18470704-18470742
          Length = 2202

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 538  LVQICTYEALGSSSILSDQVCLHIYLSVVAPNLLSH 431
            L+Q C  +A+ S ++ +D +  H+Y  + +P    H
Sbjct: 1761 LIQRCISDAVSSGNVFADAILQHLYRWLCSPRSKLH 1796


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,256,247
Number of Sequences: 37544
Number of extensions: 238183
Number of successful extensions: 535
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)