Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_G06
         (323 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26876-1|CAA81488.1|   70|Homo sapiens ribosomal protein protein.      72   5e-13
BC000603-1|AAH00603.1|   70|Homo sapiens ribosomal protein L38 p...    72   5e-13
AB007185-1|BAA25844.1|   37|Homo sapiens ribosomal protein L38 p...    64   9e-11
BC114936-1|AAI14937.1| 1099|Homo sapiens TMEM132D protein protein.     31   0.60 
BC114626-1|AAI14627.1| 1099|Homo sapiens TMEM132D protein protein.     31   0.60 
AB075824-1|BAB85530.1|  657|Homo sapiens KIAA1944 protein protein.     31   0.60 
AB061814-1|BAC97794.1| 1099|Homo sapiens HBE120 protein.               31   0.60 

>Z26876-1|CAA81488.1|   70|Homo sapiens ribosomal protein protein.
          Length = 70

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 37/56 (66%), Positives = 40/56 (71%)
 Frame = +3

Query: 105 KTF*LXRGGKTPNRSK*RRTL*NVKFKVRCSRFLYTLVITDKEKAEKLXQSLPPGL 272
           K F L    K     K ++   NVKFKVRCSR+LYTLVITDKEKAEKL QSLPPGL
Sbjct: 9   KDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGL 64



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 89  EIKDIKDFLIXARRKDAKSVKIKKN 163
           +I++IKDFL+ ARRKDAKSVKIKKN
Sbjct: 4   KIEEIKDFLLTARRKDAKSVKIKKN 28


>BC000603-1|AAH00603.1|   70|Homo sapiens ribosomal protein L38
           protein.
          Length = 70

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 37/56 (66%), Positives = 40/56 (71%)
 Frame = +3

Query: 105 KTF*LXRGGKTPNRSK*RRTL*NVKFKVRCSRFLYTLVITDKEKAEKLXQSLPPGL 272
           K F L    K     K ++   NVKFKVRCSR+LYTLVITDKEKAEKL QSLPPGL
Sbjct: 9   KDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGL 64



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 89  EIKDIKDFLIXARRKDAKSVKIKKN 163
           +I++IKDFL+ ARRKDAKSVKIKKN
Sbjct: 4   KIEEIKDFLLTARRKDAKSVKIKKN 28


>AB007185-1|BAA25844.1|   37|Homo sapiens ribosomal protein L38
           protein.
          Length = 37

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 180 FKVRCSRFLYTLVITDKEKAEKLXQSLPPGL 272
           FKVRCSR+LYTLVITDKEKAEKL QSLPPGL
Sbjct: 1   FKVRCSRYLYTLVITDKEKAEKLKQSLPPGL 31


>BC114936-1|AAI14937.1| 1099|Homo sapiens TMEM132D protein protein.
          Length = 1099

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
 Frame = +2

Query: 50  CWLKTIQSSTCRVEIKDIKDFLIXARRKDAKSVKIKKNP--------VECQVQGSMLKV 202
           CW++    S   ++I D KDF + A   D K V I ++P         E + QG+++KV
Sbjct: 711 CWVQFSDGSVTPLDIYDGKDFSLMATSLDEKVVSIHQDPKFKWPIIAAETEGQGTLVKV 769


>BC114626-1|AAI14627.1| 1099|Homo sapiens TMEM132D protein protein.
          Length = 1099

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
 Frame = +2

Query: 50  CWLKTIQSSTCRVEIKDIKDFLIXARRKDAKSVKIKKNP--------VECQVQGSMLKV 202
           CW++    S   ++I D KDF + A   D K V I ++P         E + QG+++KV
Sbjct: 711 CWVQFSDGSVTPLDIYDGKDFSLMATSLDEKVVSIHQDPKFKWPIIAAETEGQGTLVKV 769


>AB075824-1|BAB85530.1|  657|Homo sapiens KIAA1944 protein protein.
          Length = 657

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
 Frame = +2

Query: 50  CWLKTIQSSTCRVEIKDIKDFLIXARRKDAKSVKIKKNP--------VECQVQGSMLKV 202
           CW++    S   ++I D KDF + A   D K V I ++P         E + QG+++KV
Sbjct: 269 CWVQFSDGSVTPLDIYDGKDFSLMATSLDEKVVSIHQDPKFKWPIIAAETEGQGTLVKV 327


>AB061814-1|BAC97794.1| 1099|Homo sapiens HBE120 protein.
          Length = 1099

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
 Frame = +2

Query: 50  CWLKTIQSSTCRVEIKDIKDFLIXARRKDAKSVKIKKNP--------VECQVQGSMLKV 202
           CW++    S   ++I D KDF + A   D K V I ++P         E + QG+++KV
Sbjct: 711 CWVQFSDGSVTPLDIYDGKDFSLMATSLDEKVVSIHQDPKFKWPIIAAETEGQGTLVKV 769


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,416,698
Number of Sequences: 237096
Number of extensions: 602704
Number of successful extensions: 1036
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)