Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_G04
(320 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 130 1e-30
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 130 1e-30
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 130 1e-30
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 130 1e-30
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 130 1e-30
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 130 1e-30
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 32 0.44
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 0.44
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 32 0.44
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 32 0.44
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 32 0.44
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 31 0.77
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 31 1.0
AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear ribonucle... 31 1.0
DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short for... 30 1.3
DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short for... 30 1.3
DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short for... 30 1.3
DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short for... 30 1.3
DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short for... 30 1.3
DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short for... 30 1.3
BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein pr... 30 1.3
BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein. 30 1.3
BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma... 30 1.3
BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. 30 1.3
AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isofo... 30 1.3
AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor... 30 1.3
AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p... 30 1.3
AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form ... 30 1.3
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 29 2.4
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 29 2.4
AJ512612-1|CAD54757.1| 925|Homo sapiens ABCA5 transporter protein. 28 5.4
M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein. 28 7.2
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein. 28 7.2
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein. 28 7.2
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein. 28 7.2
BC026018-1|AAH26018.2| 1083|Homo sapiens LAMB1 protein protein. 28 7.2
Z99714-4|CAI17880.1| 708|Homo sapiens Hermansky-Pudlak syndrome... 27 9.5
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot... 27 9.5
CR456392-1|CAG30278.1| 708|Homo sapiens bK1048E9.4 protein. 27 9.5
BC065030-1|AAH65030.1| 708|Homo sapiens Hermansky-Pudlak syndro... 27 9.5
AY043416-1|AAK95330.1| 708|Homo sapiens LE protein protein. 27 9.5
AL365512-1|CAB97208.1| 703|Homo sapiens hypothetical protein pr... 27 9.5
AK057648-1|BAB71540.1| 528|Homo sapiens protein ( Homo sapiens ... 27 9.5
AB051454-1|BAB33337.1| 505|Homo sapiens KIAA1667 protein protein. 27 9.5
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 130 bits (313), Expect = 1e-30
Identities = 65/90 (72%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 208
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 209 PMPKLKXFQKIQIRLVRELEKKFSGKHVVF 298
P+P+LK FQKIQ+RLVRELEKKFSGKHVVF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVF 94
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 130 bits (313), Expect = 1e-30
Identities = 65/90 (72%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 208
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 209 PMPKLKXFQKIQIRLVRELEKKFSGKHVVF 298
P+P+LK FQKIQ+RLVRELEKKFSGKHVVF
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVF 92
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 130 bits (313), Expect = 1e-30
Identities = 65/90 (72%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 208
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 209 PMPKLKXFQKIQIRLVRELEKKFSGKHVVF 298
P+P+LK FQKIQ+RLVRELEKKFSGKHVVF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVF 94
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 130 bits (313), Expect = 1e-30
Identities = 65/90 (72%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 208
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 209 PMPKLKXFQKIQIRLVRELEKKFSGKHVVF 298
P+P+LK FQKIQ+RLVRELEKKFSGKHVVF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVF 94
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 130 bits (313), Expect = 1e-30
Identities = 65/90 (72%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 208
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 209 PMPKLKXFQKIQIRLVRELEKKFSGKHVVF 298
P+P+LK FQKIQ+RLVRELEKKFSGKHVVF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVF 94
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 130 bits (313), Expect = 1e-30
Identities = 65/90 (72%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 208
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 209 PMPKLKXFQKIQIRLVRELEKKFSGKHVVF 298
P+P+LK FQKIQ+RLVRELEKKFSGKHVVF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVF 94
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 89 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKXFQKIQIRLV 256
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 257 RELEKKFSGK 286
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEKK
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 89 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKXFQKIQIRLV 256
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 257 RELEKKFSGK 286
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 89 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKXFQKIQIRLV 256
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 257 RELEKKFSGK 286
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 89 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKXFQKIQIRLV 256
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 257 RELEKKFSGK 286
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 31.1 bits (67), Expect = 0.77
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 98 LVELETNSDLKAQLREL-YITKAKEIELHNK--KSIIIY-VPMPKLKXFQKIQIRLVREL 265
LVEL + D A L+ L Y++ + + + K + +IY VP ++ FQK++++ +E
Sbjct: 100 LVELG-DLDPLASLKSLTYLSILRNLVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEA 158
Query: 266 EKKFSGK 286
EK F GK
Sbjct: 159 EKMFKGK 165
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +2
Query: 44 IKASGAEADSFETSISQALVEL-ETNSDLKAQLRELYITKAKEIE--LHNK-KSI-IIYV 208
+K E D+ + Q L E E + K +L + Y + E+E H K K I +I+
Sbjct: 85 LKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHT 144
Query: 209 PMPKLKXFQKIQIRLVRELE 268
+ ++ FQK +I++ REL+
Sbjct: 145 ELKAVRQFQKRKIQVERELD 164
>AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 89 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKXFQKIQIRLV 256
+ +LVEL + D A L+ L + NKK +YV P ++ FQ+++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQRVKLKER 155
Query: 257 RELEKKFSGK 286
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short form
variant 5 protein.
Length = 1215
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short form
variant 2 protein.
Length = 1178
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 552 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 608
>DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short form
variant 7 protein.
Length = 1149
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short form
variant 6 protein.
Length = 1144
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short form
transcript variant 8 protein.
Length = 1020
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short form
protein.
Length = 1076
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 587 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 643
>BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein
protein.
Length = 627
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 444 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 500
>BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein.
Length = 1144
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain
protein) protein.
Length = 1721
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.
Length = 1716
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isoform
protein.
Length = 1220
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform
protein.
Length = 1721
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form
protein.
Length = 1721
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form
protein.
Length = 1220
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKK 274
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 77 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKXFQK--IQIR 250
+ + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508
Query: 251 LVRELEK 271
+RELEK
Sbjct: 1509 QIRELEK 1515
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 77 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKXFQK--IQIR 250
+ + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508
Query: 251 LVRELEK 271
+RELEK
Sbjct: 1509 QIRELEK 1515
>AJ512612-1|CAD54757.1| 925|Homo sapiens ABCA5 transporter protein.
Length = 925
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +2
Query: 77 ETSISQALVELETNSDLKAQLRE-----LYITKAKEIELHNKKSIIIYVPMPKLKXFQKI 241
+TSI A+++L+TN L +L + T EI+ + I+IY+ + +
Sbjct: 177 QTSIDAAIIQLKTNVSLWKELESTKAVIMGETAVVEIDTFPRGVILIYLVIAFXPFGYFL 236
Query: 242 QIRLVRELEKK 274
I +V E EKK
Sbjct: 237 AIHIVAEKEKK 247
>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 19 SCQDEYEDHQSERC*GGFLRDLDLAGAGRTRNQLRPQSPTSG 144
+CQD H ERC G+ D + R P P SG
Sbjct: 885 NCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSG 926
>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 19 SCQDEYEDHQSERC*GGFLRDLDLAGAGRTRNQLRPQSPTSG 144
+CQD H ERC G+ D + R P P SG
Sbjct: 885 NCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSG 926
>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 19 SCQDEYEDHQSERC*GGFLRDLDLAGAGRTRNQLRPQSPTSG 144
+CQD H ERC G+ D + R P P SG
Sbjct: 885 NCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSG 926
>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 19 SCQDEYEDHQSERC*GGFLRDLDLAGAGRTRNQLRPQSPTSG 144
+CQD H ERC G+ D + R P P SG
Sbjct: 885 NCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSG 926
>BC026018-1|AAH26018.2| 1083|Homo sapiens LAMB1 protein protein.
Length = 1083
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 19 SCQDEYEDHQSERC*GGFLRDLDLAGAGRTRNQLRPQSPTSG 144
+CQD H ERC G+ D + R P P SG
Sbjct: 182 NCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSG 223
>Z99714-4|CAI17880.1| 708|Homo sapiens Hermansky-Pudlak syndrome 4
protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 62 EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
E +S+ + LV L+ DL E++I +A+E+E+ + ++VP+P
Sbjct: 348 EVLGLSSSLGKELVFLQEELDLS----EIHIPEAQEVEMASGHFAFLHVPVP 395
>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain protein.
Length = 1798
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 22 CQDEYEDHQSERC*GGFLRDLDLAGAGRTRNQLRPQSPTS 141
C+D ERC GF RD L G+ R P+ P S
Sbjct: 896 CRDHTGGEHCERCIAGFHRDPRLPYGGQCRPCPCPEGPGS 935
>CR456392-1|CAG30278.1| 708|Homo sapiens bK1048E9.4 protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 62 EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
E +S+ + LV L+ DL E++I +A+E+E+ + ++VP+P
Sbjct: 348 EVLGLSSSLGKELVFLQEELDLS----EIHIPEAQEVEMASGHFAFLHVPVP 395
>BC065030-1|AAH65030.1| 708|Homo sapiens Hermansky-Pudlak syndrome
4 protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 62 EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
E +S+ + LV L+ DL E++I +A+E+E+ + ++VP+P
Sbjct: 348 EVLGLSSSLGKELVFLQEELDLS----EIHIPEAQEVEMASGHFAFLHVPVP 395
>AY043416-1|AAK95330.1| 708|Homo sapiens LE protein protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 62 EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
E +S+ + LV L+ DL E++I +A+E+E+ + ++VP+P
Sbjct: 348 EVLGLSSSLGKELVFLQEELDLS----EIHIPEAQEVEMASGHFAFLHVPVP 395
>AL365512-1|CAB97208.1| 703|Homo sapiens hypothetical protein
protein.
Length = 703
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 62 EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
E +S+ + LV L+ DL E++I +A+E+E+ + ++VP+P
Sbjct: 343 EVLGLSSSLGKELVFLQEELDLS----EIHIPEAQEVEMASGHFAFLHVPVP 390
>AK057648-1|BAB71540.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ33086 fis, clone TRACH2000461. ).
Length = 528
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 62 EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
E +S+ + LV L+ DL E++I +A+E+E+ + ++VP+P
Sbjct: 366 EVLGLSSSLGKELVFLQEELDLS----EIHIPEAQEVEMASGHFAFLHVPVP 413
>AB051454-1|BAB33337.1| 505|Homo sapiens KIAA1667 protein protein.
Length = 505
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 62 EADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
E +S+ + LV L+ DL E++I +A+E+E+ + ++VP+P
Sbjct: 145 EVLGLSSSLGKELVFLQEELDLS----EIHIPEAQEVEMASGHFAFLHVPVP 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,409,718
Number of Sequences: 237096
Number of extensions: 659078
Number of successful extensions: 1386
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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