Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_G04
(320 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 104 2e-23
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 29 0.99
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 1.3
Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical pr... 27 2.3
AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical ... 27 4.0
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 26 5.3
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 26 5.3
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 26 5.3
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 26 7.0
Z81509-3|CAB04156.1| 532|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z78063-2|CAB01503.2| 275|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 25 9.2
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 25 9.2
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 25 9.2
U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,... 25 9.2
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 104 bits (249), Expect = 2e-23
Identities = 47/86 (54%), Positives = 64/86 (74%)
Frame = +2
Query: 38 KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
K++K+ G E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P
Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66
Query: 218 KLKXFQKIQIRLVRELEKKFSGKHVV 295
+LK F KI LVRELEKKF G+ ++
Sbjct: 67 QLKAFHKIHPALVRELEKKFGGRDIL 92
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 28.7 bits (61), Expect = 0.99
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 102 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 212
S+SK T F SF Q ++K YT S SSS R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 23 VKMSTKIIKASGAEADSFE---TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKS 193
+K + K K AEA+ ++ T S+ L ELE Q +E + K++E+E+ NK+
Sbjct: 242 LKANEKARKEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQL 301
Query: 194 I 196
+
Sbjct: 302 V 302
>Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical
protein F02H6.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 185 KKSIIIYVPMPKLKXFQKIQIR---LVRELEKKFSGKHVVFGW 304
+ + I YV + K F + + L+RE EKKF K +F W
Sbjct: 357 RTTCIFYVILKNNKLFCNLLVESVVLLRECEKKFEAKLYLFRW 399
>Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical
protein F45H11.3 protein.
Length = 738
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 124 VGVGFEFDQRLRDRGLEGIRLSTARFDDL 38
V VGFE RLRD+GL +LS +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550
>AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical
protein H29C22.1 protein.
Length = 145
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 89 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 208
S+A ++LE N D+ E + K + E +NK+ + Y+
Sbjct: 33 SRAAIKLENNDDVPELFHENFEFKTCKEERYNKEQTVDYI 72
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 130 FEVGVGFEFDQRLRDRGLEGIRLSTARFDDLRTHL 26
+E GF+ QR+ DR LE A LR H+
Sbjct: 234 YEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHI 268
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 130 FEVGVGFEFDQRLRDRGLEGIRLSTARFDDLRTHL 26
+E GF+ QR+ DR LE A LR H+
Sbjct: 234 YEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHI 268
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 130 FEVGVGFEFDQRLRDRGLEGIRLSTARFDDLRTHL 26
+E GF+ QR+ DR LE A LR H+
Sbjct: 234 YEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHI 268
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 117 LVSSSTSACEIEVSKESASAPLALMIFVLILTTL 16
L+ S+SAC I +S S S P+A+ +LT L
Sbjct: 479 LIEQSSSACGIMISCISPSLPIAMSTAGPMLTLL 512
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 80 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKXFQKIQIRLV 256
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLV 2272
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 80 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKXFQKIQIRLV 256
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLV 2272
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 80 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKXFQKIQIRLV 256
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLV 2272
>Z81509-3|CAB04156.1| 532|Caenorhabditis elegans Hypothetical
protein F21A3.5 protein.
Length = 532
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 104 ELETNSDLKAQ-LRELYITKAKEIELHNKKSIIIYVPMPKLKXFQKIQIRLVRELEKKFS 280
++ +SD + + + E+++ A+ I+LH K +IY P + Q + EL+
Sbjct: 182 DITVSSDKRHRAIDEIHLRTAESIDLHWKTGDLIYAPR---SFVDRDQSHRMTELDMMEM 238
Query: 281 GKHVVFGW 304
+V++ W
Sbjct: 239 MLYVLYDW 246
>Z78063-2|CAB01503.2| 275|Caenorhabditis elegans Hypothetical
protein F45D3.2 protein.
Length = 275
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 8 PSRKVVKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNK 187
PS + + S + S TS+ + LVE + ++R + +TK +E + K
Sbjct: 158 PSLPITTSTITCSSNSSPSSSSITTSVLRTLVEDDDADVHPNKVRPIQVTKEEEDLVRRK 217
Query: 188 -KSIIIYVPMPKLK 226
+ ++ +P+ KL+
Sbjct: 218 TQELLKSMPLQKLE 231
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 111 SSSTSACEIEVSKESASAPLALMIFVL 31
+S+TS+C I+ +S S+P AL VL
Sbjct: 95 ASTTSSCPIQSCSQSFSSPAALTWHVL 121
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 111 SSSTSACEIEVSKESASAPLALMIFVL 31
+S+TS+C I+ +S S+P AL VL
Sbjct: 66 ASTTSSCPIQSCSQSFSSPAALTWHVL 92
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 111 SSSTSACEIEVSKESASAPLALMIFVL 31
+S+TS+C I+ +S S+P AL VL
Sbjct: 95 ASTTSSCPIQSCSQSFSSPAALTWHVL 121
>U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,
short chain protein29 protein.
Length = 427
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 163 SFCNVKLPKLGFEVGVGFEFDQRLRDRGLEGIRLST 56
S+C K G + E LRDRGLEGI+ +T
Sbjct: 189 SYCTSKFAVRGAMESLQME----LRDRGLEGIKTTT 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,206,621
Number of Sequences: 27780
Number of extensions: 102240
Number of successful extensions: 367
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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