Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_F19
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   272   4e-73
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   270   1e-72
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   269   2e-72
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   269   2e-72
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   169   3e-42
AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA...    30   2.3  
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB...    30   2.3  
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    30   3.1  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    30   3.1  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    30   3.1  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   7.1  

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  272 bits (666), Expect = 4e-73
 Identities = 124/139 (89%), Positives = 129/139 (92%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   FSRL--WCHFVK-ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDD 173
           FSR+  W   V  + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+D
Sbjct: 5   FSRVLRWKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVED 64

Query: 174 FPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSC 353
           FPLCVHLVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSC
Sbjct: 65  FPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSC 124

Query: 354 AGADRLQTGMRGAFGKPXG 410
           AGADRLQTGMRGAFGKP G
Sbjct: 125 AGADRLQTGMRGAFGKPQG 143



 Score =  136 bits (329), Expect = 2e-32
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = +1

Query: 412 TVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFDXL 591
           TV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ ++ L
Sbjct: 144 TVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEEL 203

Query: 592 REXGRLANDGCIVQYRPE 645
           R+  RL  DGC V+YRPE
Sbjct: 204 RDDNRLEPDGCNVKYRPE 221


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  270 bits (662), Expect = 1e-72
 Identities = 119/126 (94%), Positives = 123/126 (97%)
 Frame = +3

Query: 33  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 212
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 213 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 392
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 393 FGKPXG 410
           FGKP G
Sbjct: 132 FGKPQG 137



 Score =  136 bits (329), Expect = 2e-32
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = +1

Query: 412 TVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFDXL 591
           TV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ ++ L
Sbjct: 138 TVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEEL 197

Query: 592 REXGRLANDGCIVQYRPE 645
           R+  RL  DGC V+YRPE
Sbjct: 198 RDDNRLEPDGCNVKYRPE 215


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  269 bits (660), Expect = 2e-72
 Identities = 119/124 (95%), Positives = 122/124 (98%)
 Frame = +3

Query: 39  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 218
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 219 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 398
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 399 KPXG 410
           KP G
Sbjct: 121 KPQG 124



 Score =  136 bits (329), Expect = 2e-32
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = +1

Query: 412 TVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFDXL 591
           TV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ ++ L
Sbjct: 125 TVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEEL 184

Query: 592 REXGRLANDGCIVQYRPE 645
           R+  RL  DGC V+YRPE
Sbjct: 185 RDDNRLEPDGCNVKYRPE 202


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  269 bits (660), Expect = 2e-72
 Identities = 119/124 (95%), Positives = 122/124 (98%)
 Frame = +3

Query: 39  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 218
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 219 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 398
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 399 KPXG 410
           KP G
Sbjct: 121 KPQG 124



 Score =  136 bits (329), Expect = 2e-32
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = +1

Query: 412 TVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFDXL 591
           TV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ ++ L
Sbjct: 125 TVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEEL 184

Query: 592 REXGRLANDGCIVQYRPE 645
           R+  RL  DGC V+YRPE
Sbjct: 185 RDDNRLEPDGCNVKYRPE 202


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  169 bits (411), Expect = 3e-42
 Identities = 75/92 (81%), Positives = 82/92 (89%)
 Frame = +3

Query: 33  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 212
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 5   VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64

Query: 213 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 308
           QLSSEALEAGRICCNK ++   G D+    MR
Sbjct: 65  QLSSEALEAGRICCNK-MLSCAGADRLQTGMR 95



 Score =  136 bits (329), Expect = 2e-32
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = +1

Query: 412 TVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFDXL 591
           TV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ ++ L
Sbjct: 104 TVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEEL 163

Query: 592 REXGRLANDGCIVQYRPE 645
           R+  RL  DGC V+YRPE
Sbjct: 164 RDDNRLEPDGCNVKYRPE 181


>AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA,
           isoform A protein.
          Length = 499

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 449 PCALXTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLTXCVXRAASLMTAA 625
           P  L  GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 626 LCSTA 640
           L  TA
Sbjct: 355 LAKTA 359


>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
           isoform B protein.
          Length = 1209

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 449 PCALXTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLTXCVXRAASLMTAA 625
           P  L  GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 626 LCSTA 640
           L  TA
Sbjct: 355 LAKTA 359


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 6    SRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 116
            S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1107 SYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 6   SRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 116
           S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 514 SYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 6    SRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 116
            S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1107 SYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 237 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 97
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,337,826
Number of Sequences: 53049
Number of extensions: 725055
Number of successful extensions: 2055
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2054
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)