Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_F18
         (319 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     64   2e-11
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     63   4e-11
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    63   4e-11
08_02_1440 - 27113396-27113418,27113976-27114102                       25   9.7  
07_03_1600 - 28024495-28024509,28024681-28024731,28025083-280253...    25   9.7  

>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 112 VKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 225
           VKFKVRCSR+LYTL + D +KA KLKQSLPPGL V+EV
Sbjct: 32  VKFKVRCSRYLYTLCVHDTDKANKLKQSLPPGLTVQEV 69


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +1

Query: 112 VKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 225
           VKFKVRCS++LYTL + D +KA KLKQSLPPGL V+EV
Sbjct: 32  VKFKVRCSKYLYTLCVFDADKANKLKQSLPPGLTVQEV 69


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +1

Query: 112 VKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 225
           VKFKVRCS++LYTL + D +KA KLKQSLPPGL V+EV
Sbjct: 62  VKFKVRCSKYLYTLCVFDADKANKLKQSLPPGLTVQEV 99


>08_02_1440 - 27113396-27113418,27113976-27114102
          Length = 49

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 169 EKAEKLKQSLPPGLQ 213
           E A KLKQ LPPG Q
Sbjct: 25  ENANKLKQFLPPGSQ 39


>07_03_1600 -
           28024495-28024509,28024681-28024731,28025083-28025355,
           28025427-28025554,28025645-28025764,28025856-28025933,
           28025993-28026061,28026183-28026213
          Length = 254

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 152 WSSLTKRRLRNLSRVYLQVSKLK 220
           WS LTK+   N+SRV + ++  K
Sbjct: 77  WSKLTKKVASNVSRVVVSLASFK 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,183,083
Number of Sequences: 37544
Number of extensions: 70294
Number of successful extensions: 148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)