Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_F18
         (319 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26876-1|CAA81488.1|   70|Homo sapiens ribosomal protein protein.      82   4e-16
BC000603-1|AAH00603.1|   70|Homo sapiens ribosomal protein L38 p...    82   4e-16
AB007185-1|BAA25844.1|   37|Homo sapiens ribosomal protein L38 p...    74   8e-14
BC014655-1|AAH14655.1|  173|Homo sapiens chromosome 19 open read...    29   4.0  
BC010129-1|AAH10129.1|  173|Homo sapiens chromosome 19 open read...    29   4.0  
BC003639-1|AAH03639.2|  168|Homo sapiens C19orf10 protein protein.     29   4.0  
AL365374-1|CAB96948.1|  170|Homo sapiens R33729_1 hypothetical p...    29   4.0  
AL365373-1|CAB96947.1|  170|Homo sapiens R33729_1 hypothetical p...    29   4.0  
AC005594-1|AAC33800.1|  152|Homo sapiens R33729_1, partial CDS p...    29   4.0  
AC005339-1|AAC27824.1|   99|Homo sapiens R33729_1 protein.             29   4.0  
U02390-1|AAA20587.1|  477|Homo sapiens CAP2 protein.                   27   9.1  
CR457022-1|CAG33303.1|  477|Homo sapiens CAP2 protein.                 27   9.1  
BC008481-1|AAH08481.1|  477|Homo sapiens CAP, adenylate cyclase-...    27   9.1  
AL138824-4|CAI12250.1|  474|Homo sapiens CAP, adenylate cyclase-...    27   9.1  
AL034372-3|CAC26824.2|  474|Homo sapiens CAP, adenylate cyclase-...    27   9.1  

>Z26876-1|CAA81488.1|   70|Homo sapiens ribosomal protein protein.
          Length = 70

 Score = 81.8 bits (193), Expect = 4e-16
 Identities = 41/70 (58%), Positives = 45/70 (64%)
 Frame = +1

Query: 19  MPREIXXXXXXXXXXXXXXXXXXXXXXXPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 198
           MPR+I                        +NVKFKVRCSR+LYTLVITDKEKAEKLKQSL
Sbjct: 1   MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 199 PPGLQVKEVK 228
           PPGL VKE+K
Sbjct: 61  PPGLAVKELK 70


>BC000603-1|AAH00603.1|   70|Homo sapiens ribosomal protein L38
           protein.
          Length = 70

 Score = 81.8 bits (193), Expect = 4e-16
 Identities = 41/70 (58%), Positives = 45/70 (64%)
 Frame = +1

Query: 19  MPREIXXXXXXXXXXXXXXXXXXXXXXXPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 198
           MPR+I                        +NVKFKVRCSR+LYTLVITDKEKAEKLKQSL
Sbjct: 1   MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 199 PPGLQVKEVK 228
           PPGL VKE+K
Sbjct: 61  PPGLAVKELK 70


>AB007185-1|BAA25844.1|   37|Homo sapiens ribosomal protein L38
           protein.
          Length = 37

 Score = 74.1 bits (174), Expect = 8e-14
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +1

Query: 118 FKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 228
           FKVRCSR+LYTLVITDKEKAEKLKQSLPPGL VKE+K
Sbjct: 1   FKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKELK 37


>BC014655-1|AAH14655.1|  173|Homo sapiens chromosome 19 open reading
           frame 10 protein.
          Length = 173

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 230 HFTSLTWRPGGKLCLSFSAFSLSV 159
           HFT   WRP GK  L F+ F   V
Sbjct: 89  HFTCTIWRPQGKSYLYFTQFKAEV 112


>BC010129-1|AAH10129.1|  173|Homo sapiens chromosome 19 open reading
           frame 10 protein.
          Length = 173

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 230 HFTSLTWRPGGKLCLSFSAFSLSV 159
           HFT   WRP GK  L F+ F   V
Sbjct: 89  HFTCTIWRPQGKSYLYFTQFKAEV 112


>BC003639-1|AAH03639.2|  168|Homo sapiens C19orf10 protein protein.
          Length = 168

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 230 HFTSLTWRPGGKLCLSFSAFSLSV 159
           HFT   WRP GK  L F+ F   V
Sbjct: 84  HFTCTIWRPQGKSYLYFTQFKAEV 107


>AL365374-1|CAB96948.1|  170|Homo sapiens R33729_1 hypothetical
           protein protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 230 HFTSLTWRPGGKLCLSFSAFSLSV 159
           HFT   WRP GK  L F+ F   V
Sbjct: 86  HFTCTIWRPQGKSYLYFTQFKAEV 109


>AL365373-1|CAB96947.1|  170|Homo sapiens R33729_1 hypothetical
           protein protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 230 HFTSLTWRPGGKLCLSFSAFSLSV 159
           HFT   WRP GK  L F+ F   V
Sbjct: 86  HFTCTIWRPQGKSYLYFTQFKAEV 109


>AC005594-1|AAC33800.1|  152|Homo sapiens R33729_1, partial CDS
           protein.
          Length = 152

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 230 HFTSLTWRPGGKLCLSFSAFSLSV 159
           HFT   WRP GK  L F+ F   V
Sbjct: 94  HFTCTIWRPQGKSYLYFTQFKAEV 117


>AC005339-1|AAC27824.1|   99|Homo sapiens R33729_1 protein.
          Length = 99

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 230 HFTSLTWRPGGKLCLSFSAFSLSV 159
           HFT   WRP GK  L F+ F   V
Sbjct: 15  HFTCTIWRPQGKSYLYFTQFKAEV 38


>U02390-1|AAA20587.1|  477|Homo sapiens CAP2 protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 233 HHFTSLTWRPGGKLCLSFSAFSL 165
           HH T LTW   G +  + SAFS+
Sbjct: 202 HHTTGLTWSKTGPVASTVSAFSV 224


>CR457022-1|CAG33303.1|  477|Homo sapiens CAP2 protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 233 HHFTSLTWRPGGKLCLSFSAFSL 165
           HH T LTW   G +  + SAFS+
Sbjct: 202 HHTTGLTWSKTGPVASTVSAFSV 224


>BC008481-1|AAH08481.1|  477|Homo sapiens CAP, adenylate
           cyclase-associated protein, 2 (yeast) protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 233 HHFTSLTWRPGGKLCLSFSAFSL 165
           HH T LTW   G +  + SAFS+
Sbjct: 202 HHTTGLTWSKTGPVASTVSAFSV 224


>AL138824-4|CAI12250.1|  474|Homo sapiens CAP, adenylate
           cyclase-associated protein, 2 (yeast) protein.
          Length = 474

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 233 HHFTSLTWRPGGKLCLSFSAFSL 165
           HH T LTW   G +  + SAFS+
Sbjct: 199 HHTTGLTWSKTGPVASTVSAFSV 221


>AL034372-3|CAC26824.2|  474|Homo sapiens CAP, adenylate
           cyclase-associated protein, 2 (yeast) protein.
          Length = 474

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 233 HHFTSLTWRPGGKLCLSFSAFSL 165
           HH T LTW   G +  + SAFS+
Sbjct: 199 HHTTGLTWSKTGPVASTVSAFSV 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,163,496
Number of Sequences: 237096
Number of extensions: 392749
Number of successful extensions: 869
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)