BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_F16
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a pro... 206 5e-53
X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein. 206 5e-53
X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRN... 206 5e-53
M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein. 206 5e-53
BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a p... 206 5e-53
AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a p... 174 3e-43
AL158826-10|CAI12834.1| 151|Homo sapiens ribosomal protein L7a ... 89 2e-17
AB056665-1|BAB39381.1| 142|Homo sapiens ribosomal protein L7a p... 89 2e-17
Z83840-3|CAB46207.1| 128|Homo sapiens NHP2 non-histone chromoso... 44 4e-04
D50420-1|BAA23363.1| 128|Homo sapiens OTK27 protein. 44 4e-04
CR541725-1|CAG46526.1| 128|Homo sapiens NHP2L1 protein. 44 4e-04
CR456531-1|CAG30417.1| 128|Homo sapiens NHP2L1 protein. 44 4e-04
BC095439-1|AAH95439.1| 128|Homo sapiens NHP2 non-histone chromo... 44 4e-04
BC019282-1|AAH19282.1| 128|Homo sapiens NHP2L1 protein protein. 44 4e-04
BC005358-1|AAH05358.1| 128|Homo sapiens NHP2 non-histone chromo... 44 4e-04
AF155235-1|AAF06959.1| 128|Homo sapiens 15.5 kD RNA binding pro... 44 4e-04
AF091076-1|AAC72945.1| 128|Homo sapiens OTK27 protein. 44 4e-04
X06704-1|CAA29888.1| 439|Homo sapiens protein ( Human mRNA for ... 31 4.7
U20272-1|AAA75623.1| 363|Homo sapiens DNA/RNA-binding protein p... 30 6.2
U14134-1|AAA21873.1| 338|Homo sapiens transcription factor IIIA... 30 6.2
>X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRNA.
).
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 206 bits (503), Expect = 5e-53
Identities = 98/152 (64%), Positives = 110/152 (72%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 148
Query: 553 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 149 NKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 180
>AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a
protein.
Length = 191
Score = 174 bits (423), Expect = 3e-43
Identities = 83/136 (61%), Positives = 94/136 (69%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD
Sbjct: 56 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 115
Query: 373 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 552
+ TA L K+ KYRPET RP +R+G NTVT LVE
Sbjct: 116 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVE 175
Query: 553 KKKAQLVVIAHDVDPI 600
KKAQLVVIAHDVDPI
Sbjct: 176 NKKAQLVVIAHDVDPI 191
>AL158826-10|CAI12834.1| 151|Homo sapiens ribosomal protein L7a
protein.
Length = 151
Score = 88.6 bits (210), Expect = 2e-17
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 502 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
RP +R+G NTVT LVE KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 17 RPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 65
>AB056665-1|BAB39381.1| 142|Homo sapiens ribosomal protein L7a
protein.
Length = 142
Score = 88.6 bits (210), Expect = 2e-17
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 502 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
RP +R+G NTVT LVE KKAQLVVIAHDVDPIELV+FLPALCRKMGVP
Sbjct: 8 RPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVP 56
>Z83840-3|CAB46207.1| 128|Homo sapiens NHP2 non-histone chromosome
protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>D50420-1|BAA23363.1| 128|Homo sapiens OTK27 protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>CR541725-1|CAG46526.1| 128|Homo sapiens NHP2L1 protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>CR456531-1|CAG30417.1| 128|Homo sapiens NHP2L1 protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>BC095439-1|AAH95439.1| 128|Homo sapiens NHP2 non-histone
chromosome protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>BC019282-1|AAH19282.1| 128|Homo sapiens NHP2L1 protein protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>BC005358-1|AAH05358.1| 128|Homo sapiens NHP2 non-histone
chromosome protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>AF155235-1|AAF06959.1| 128|Homo sapiens 15.5 kD RNA binding
protein protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>AF091076-1|AAC72945.1| 128|Homo sapiens OTK27 protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 514 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVP 648
+R G N TK + + ++ +V+A D +P+E++L LP LC VP
Sbjct: 35 LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVP 79
>X06704-1|CAA29888.1| 439|Homo sapiens protein ( Human mRNA for
trk-2h oncogene. ).
Length = 439
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 193 NPLFEKRPKNFAI 231
NPLFEKRPKNF I
Sbjct: 29 NPLFEKRPKNFGI 41
>U20272-1|AAA75623.1| 363|Homo sapiens DNA/RNA-binding protein
protein.
Length = 363
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 301 AGCGYTWAILQIWTSHELAECPDQ*QSSLASSRREDSRS 185
AGCG T+A+ Q T H + PD+ + L + + RS
Sbjct: 280 AGCGKTFAMKQSLTRHAVVHDPDKKKMKLKVKKSREKRS 318
>U14134-1|AAA21873.1| 338|Homo sapiens transcription factor IIIA
protein.
Length = 338
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 301 AGCGYTWAILQIWTSHELAECPDQ*QSSLASSRREDSRS 185
AGCG T+A+ Q T H + PD+ + L + + RS
Sbjct: 255 AGCGKTFAMKQSLTRHAVVHDPDKKKMKLKVKKSREKRS 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,021,762
Number of Sequences: 237096
Number of extensions: 1565983
Number of successful extensions: 7999
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7973
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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