Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_F15
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 261 3e-70
Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 51 8e-07
AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical ... 30 1.2
U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 6.1
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 6.1
AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical ... 28 6.1
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC006795-3|AAF59494.1| 369|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical
protein F28D1.7 protein.
Length = 143
Score = 261 bits (639), Expect = 3e-70
Identities = 117/142 (82%), Positives = 131/142 (92%)
Frame = +3
Query: 99 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 278
GKP+G+ TARK HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GVEAKQ
Sbjct: 2 GKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQ 61
Query: 279 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 458
PNSAIRKCVRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAVGDIPGVRFK
Sbjct: 62 PNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFK 121
Query: 459 VVKVANVSLLALYKEKKERPRS 524
+VKVAN SL+AL+K KKERPRS
Sbjct: 122 IVKVANTSLIALFKGKKERPRS 143
>Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical
protein T03D8.2 protein.
Length = 157
Score = 50.8 bits (116), Expect = 8e-07
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3
Query: 222 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 401
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 402 AGFGRK 419
G GR+
Sbjct: 129 KG-GRR 133
>AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical
protein Y55D5A.3 protein.
Length = 355
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/98 (25%), Positives = 38/98 (38%)
Frame = -2
Query: 440 NVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYT 261
N+T V F Y +TG G + LN Y+ A+ D L+ FYT
Sbjct: 150 NITIHVDFVRNGTIQYSGLTFALYNGVLTGQRPGEYSVSLNARYSGAYIDNI--LMEFYT 207
Query: 260 NFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFT 147
F + +R E + T+ ++ F R LF+
Sbjct: 208 KFKRPVSFFIRDVLENQA----TYTEAVDAFSRTHLFS 241
>U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical
protein D2024.4 protein.
Length = 294
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 167 VRPSLFTTVVHVLTRRSYSSGFT*NC 90
VRP + TTV+HV+ R SG C
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSGRAEQC 214
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 460 TLKRTPGMSPTA*PLRPNPATSTSS 386
T RTP +P A P RP P+ S+++
Sbjct: 38 TTMRTPAATPAAPPTRPTPSRSSAA 62
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 460 TLKRTPGMSPTA*PLRPNPATSTSS 386
T RTP +P A P RP P+ S+++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191
>AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical
protein C49A9.6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Frame = +3
Query: 93 ISGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFG--------GASHAKGIV 248
+ K + + KH H + + D FKK GT+W +G G + +G +
Sbjct: 235 VDSKTESLFVSNKH--HLEQGHFFDGNFKKNADGTRWTCQNYGQPVEQLAEGGINQRGKI 292
Query: 249 LEKVGVEAKQPNSAIRK 299
V +E QP RK
Sbjct: 293 FFTVKIENFQPARGNRK 309
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 339 TAFVPRDGCLNHIEEN 386
T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668
>AC006795-3|AAF59494.1| 369|Caenorhabditis elegans Hypothetical
protein Y50D4B.5 protein.
Length = 369
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 138 SRAYAPFVFLGVYLKLRCRRLSITNVYKT 52
S Y PF+FL Y+ LR R S + KT
Sbjct: 19 SNRYVPFIFLSKYVLLRSRSTSSHHSCKT 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,493,144
Number of Sequences: 27780
Number of extensions: 319977
Number of successful extensions: 771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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