Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_F07
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051837-1|AAK93261.1|  383|Drosophila melanogaster LD34157p pro...   134   1e-31
AE014297-3346|AAF56152.1|  383|Drosophila melanogaster CG10184-P...   134   1e-31
AE014298-2075|AAF48402.1|  646|Drosophila melanogaster CG9509-PA...    29   6.7  
AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p pro...    28   8.9  
AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA...    28   8.9  

>AY051837-1|AAK93261.1|  383|Drosophila melanogaster LD34157p
           protein.
          Length = 383

 Score =  134 bits (323), Expect = 1e-31
 Identities = 61/92 (66%), Positives = 74/92 (80%)
 Frame = +2

Query: 344 ENKIAALLGKQAALFVPSGTMANLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGV 523
           E + AA+ GK+A LFVPSGTM NL+AIMVHC++RG+EA VGDLSHI+ YE GGASHLAGV
Sbjct: 45  EARTAAIFGKEAGLFVPSGTMGNLLAIMVHCHRRGTEALVGDLSHIFLYEQGGASHLAGV 104

Query: 524 MLSTVANKPDGTFDLQELEDRIRGSNIHEPXT 619
            L+T+ N+ DGTF LQ+L  RIR  + HEP T
Sbjct: 105 QLATLKNEQDGTFSLQDLRRRIRHEDCHEPIT 136



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +1

Query: 226 VVDLRSDTVTKPTKAMKHAMVNSALGDDVYGEDPTVNALGE*NSCTAG-QAGRFV 387
           VVDLRSDTV++PT  M+  M  + +GDDVYGEDPTVN L    +   G +AG FV
Sbjct: 6   VVDLRSDTVSQPTDKMRARMATAVVGDDVYGEDPTVNELEARTAAIFGKEAGLFV 60


>AE014297-3346|AAF56152.1|  383|Drosophila melanogaster CG10184-PA
           protein.
          Length = 383

 Score =  134 bits (323), Expect = 1e-31
 Identities = 61/92 (66%), Positives = 74/92 (80%)
 Frame = +2

Query: 344 ENKIAALLGKQAALFVPSGTMANLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGV 523
           E + AA+ GK+A LFVPSGTM NL+AIMVHC++RG+EA VGDLSHI+ YE GGASHLAGV
Sbjct: 45  EARTAAIFGKEAGLFVPSGTMGNLLAIMVHCHRRGTEALVGDLSHIFLYEQGGASHLAGV 104

Query: 524 MLSTVANKPDGTFDLQELEDRIRGSNIHEPXT 619
            L+T+ N+ DGTF LQ+L  RIR  + HEP T
Sbjct: 105 QLATLKNEQDGTFSLQDLRRRIRHEDCHEPIT 136



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +1

Query: 226 VVDLRSDTVTKPTKAMKHAMVNSALGDDVYGEDPTVNALGE*NSCTAG-QAGRFV 387
           VVDLRSDTV++PT  M+  M  + +GDDVYGEDPTVN L    +   G +AG FV
Sbjct: 6   VVDLRSDTVSQPTDKMRARMATAVVGDDVYGEDPTVNELEARTAAIFGKEAGLFV 60


>AE014298-2075|AAF48402.1|  646|Drosophila melanogaster CG9509-PA
           protein.
          Length = 646

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 458 FVGDLSHIYKYEVGGASHLAGVMLSTVANKPD 553
           +VGDLS  Y + V GA     V+ S ++  PD
Sbjct: 61  YVGDLSQPYDFVVIGAGSAGSVVASRLSENPD 92


>AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p
           protein.
          Length = 449

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 466 PDECFRSTLVTVHHNGNKISHSSRR 392
           P ECF  +LV V +N NK+   S +
Sbjct: 364 PPECFYQSLVEVQNNDNKLKRKSAK 388


>AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA
           protein.
          Length = 449

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 466 PDECFRSTLVTVHHNGNKISHSSRR 392
           P ECF  +LV V +N NK+   S +
Sbjct: 364 PPECFYQSLVEVQNNDNKLKRKSAK 388


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,048,416
Number of Sequences: 53049
Number of extensions: 466743
Number of successful extensions: 990
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)