Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_F07
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70309-13|CAL36512.2|  383|Caenorhabditis elegans Hypothetical p...    94   6e-20
Z70309-12|CAB54293.3|  413|Caenorhabditis elegans Hypothetical p...    94   6e-20
Z70309-11|CAB54291.3|  408|Caenorhabditis elegans Hypothetical p...    94   6e-20
U29244-10|AAC71091.2|  908|Caenorhabditis elegans Hypothetical p...    29   3.5  

>Z70309-13|CAL36512.2|  383|Caenorhabditis elegans Hypothetical
           protein R102.4c protein.
          Length = 383

 Score = 94.3 bits (224), Expect = 6e-20
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = +2

Query: 344 ENKIAALLGKQAALFVPSGTMANLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGV 523
           E + A L GK+A LFV SGTM NL+AIM HC +RG E  VG  +HI+++E G  +  AG+
Sbjct: 75  EQRCAELFGKEAGLFVTSGTMGNLLAIMAHC-QRGEEIIVGRYNHIHRWEQGNYAQFAGI 133

Query: 524 MLSTVANKPDGTFDLQELEDRIRGSNIHEP 613
             +T+  KPDGT DL ++E  IR  + H P
Sbjct: 134 SATTLEVKPDGTMDLNDIEQAIRVKDCHMP 163



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 145 N*NHLKFSSNFDN*FAVFLNNCDKMAHVVDLRSDTVTKPTKAMKHAMVNSALGDDVYGED 324
           N N +  S++  +  + +    +K    +DLRSDTVT P+  M+ AM  + +GDDVYGED
Sbjct: 9   NGNGISASTDLLDTPSAYTQKSNKTHTSIDLRSDTVTVPSVEMRRAMAEAIVGDDVYGED 68

Query: 325 PTVNALGE*NSCTAG-QAGRFV 387
            T N L +  +   G +AG FV
Sbjct: 69  TTTNRLEQRCAELFGKEAGLFV 90


>Z70309-12|CAB54293.3|  413|Caenorhabditis elegans Hypothetical
           protein R102.4b protein.
          Length = 413

 Score = 94.3 bits (224), Expect = 6e-20
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = +2

Query: 344 ENKIAALLGKQAALFVPSGTMANLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGV 523
           E + A L GK+A LFV SGTM NL+AIM HC +RG E  VG  +HI+++E G  +  AG+
Sbjct: 105 EQRCAELFGKEAGLFVTSGTMGNLLAIMAHC-QRGEEIIVGRYNHIHRWEQGNYAQFAGI 163

Query: 524 MLSTVANKPDGTFDLQELEDRIRGSNIHEP 613
             +T+  KPDGT DL ++E  IR  + H P
Sbjct: 164 SATTLEVKPDGTMDLNDIEQAIRVKDCHMP 193



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 145 N*NHLKFSSNFDN*FAVFLNNCDKMAHVVDLRSDTVTKPTKAMKHAMVNSALGDDVYGED 324
           N N +  S++  +  + +    +K    +DLRSDTVT P+  M+ AM  + +GDDVYGED
Sbjct: 39  NGNGISASTDLLDTPSAYTQKSNKTHTSIDLRSDTVTVPSVEMRRAMAEAIVGDDVYGED 98

Query: 325 PTVNALGE*NSCTAG-QAGRFV 387
            T N L +  +   G +AG FV
Sbjct: 99  TTTNRLEQRCAELFGKEAGLFV 120


>Z70309-11|CAB54291.3|  408|Caenorhabditis elegans Hypothetical
           protein R102.4a protein.
          Length = 408

 Score = 94.3 bits (224), Expect = 6e-20
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = +2

Query: 344 ENKIAALLGKQAALFVPSGTMANLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGV 523
           E + A L GK+A LFV SGTM NL+AIM HC +RG E  VG  +HI+++E G  +  AG+
Sbjct: 100 EQRCAELFGKEAGLFVTSGTMGNLLAIMAHC-QRGEEIIVGRYNHIHRWEQGNYAQFAGI 158

Query: 524 MLSTVANKPDGTFDLQELEDRIRGSNIHEP 613
             +T+  KPDGT DL ++E  IR  + H P
Sbjct: 159 SATTLEVKPDGTMDLNDIEQAIRVKDCHMP 188



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 145 N*NHLKFSSNFDN*FAVFLNNCDKMAHVVDLRSDTVTKPTKAMKHAMVNSALGDDVYGED 324
           N N +  S++  +  + +    +K    +DLRSDTVT P+  M+ AM  + +GDDVYGED
Sbjct: 34  NGNGISASTDLLDTPSAYTQKSNKTHTSIDLRSDTVTVPSVEMRRAMAEAIVGDDVYGED 93

Query: 325 PTVNALGE*NSCTAG-QAGRFV 387
            T N L +  +   G +AG FV
Sbjct: 94  TTTNRLEQRCAELFGKEAGLFV 115


>U29244-10|AAC71091.2|  908|Caenorhabditis elegans Hypothetical
           protein ZK1248.10 protein.
          Length = 908

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 219 HFITII*KDR-KLIVEITAKLQMILIELHSRYLLYLSHFK 103
           H IT   +DR K ++     L+    +L SRYL+ L+HFK
Sbjct: 480 HAITQSLEDREKKLIRQNFDLEACYYQLKSRYLMVLNHFK 519


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,322,815
Number of Sequences: 27780
Number of extensions: 237245
Number of successful extensions: 479
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)