Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_F04
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...   159   2e-39
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...   159   2e-39
AE014296-2059|AAF49989.1|  747|Drosophila melanogaster CG7260-PA...    29   6.5  
AE014134-438|AAO41161.1| 1283|Drosophila melanogaster CG33125-PA...    29   6.5  

>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score =  159 bits (387), Expect = 2e-39
 Identities = 72/103 (69%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = +2

Query: 296 PDEDEVSPIVDNDNVFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYILSV-T 472
           P+E EV+ IVDND VF+ILYKELYYR I+AR+PGGPK EQR +SF+NYCD FN I+S   
Sbjct: 83  PEEQEVAAIVDNDKVFLILYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQN 142

Query: 473 PVPLELPDQWLWELIDEFVYQFQSFAQYRSRTTKLSPAEIEAL 601
           PV LELPD WLWEL+DEFVYQFQ+FAQYR+R T+ S  EI+ L
Sbjct: 143 PVMLELPDIWLWELVDEFVYQFQNFAQYRARLTEKSQDEIQQL 185



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 184 LXYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPW 294
           L  F   I EG  Y+I N+YENTFP +++ +F+ T W
Sbjct: 46  LINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAW 82


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score =  159 bits (387), Expect = 2e-39
 Identities = 72/103 (69%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = +2

Query: 296 PDEDEVSPIVDNDNVFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYILSV-T 472
           P+E EV+ IVDND VF+ILYKELYYR I+AR+PGGPK EQR +SF+NYCD FN I+S   
Sbjct: 83  PEEQEVAAIVDNDKVFLILYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQN 142

Query: 473 PVPLELPDQWLWELIDEFVYQFQSFAQYRSRTTKLSPAEIEAL 601
           PV LELPD WLWEL+DEFVYQFQ+FAQYR+R T+ S  EI+ L
Sbjct: 143 PVMLELPDIWLWELVDEFVYQFQNFAQYRARLTEKSQDEIQQL 185



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 184 LXYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPW 294
           L  F   I EG  Y+I N+YENTFP +++ +F+ T W
Sbjct: 46  LINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAW 82


>AE014296-2059|AAF49989.1|  747|Drosophila melanogaster CG7260-PA
           protein.
          Length = 747

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 51  YSSDDYNEGGYESYGDYEAQSTEHYEPEY 137
           YS+  ++ G    YG Y+  +  +Y+PEY
Sbjct: 613 YSASGWHNGSGAEYGLYQNAAAAYYQPEY 641


>AE014134-438|AAO41161.1| 1283|Drosophila melanogaster CG33125-PA
           protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +3

Query: 42  TTMYSSDDYNEG---GYESYGDY-EAQSTEHYEPEYDRSSYYKMPD 167
           +T Y SD+  +G    Y+ Y DY E  + E Y+  Y+    Y+ PD
Sbjct: 301 STEYGSDNDYDGYPENYKKYRDYYEEPTAEAYQNPYEEFHDYEYPD 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,066,232
Number of Sequences: 53049
Number of extensions: 557402
Number of successful extensions: 1533
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)