Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_E16
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 256 7e-69
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 251 3e-67
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 68 7e-12
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 68 7e-12
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 68 7e-12
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 66 2e-11
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 66 3e-11
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 62 3e-10
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 62 3e-10
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 60 1e-09
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 60 1e-09
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 47 1e-05
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 46 2e-05
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 46 2e-05
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 29 2.8
Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 256 bits (628), Expect = 7e-69
Identities = 124/164 (75%), Positives = 143/164 (87%)
Frame = +1
Query: 157 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKG 336
R YAKDV+FGA+ R ML GV++LADAV+VTMGPKGRNVI+EQSWGSPKITKDGVTVAK
Sbjct: 15 RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKS 74
Query: 337 VELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRG 516
++LKDK+QN+GAKL+Q+VAN NEEAGDGTT ATVLARAIAKEGFE I +G N +EIRRG
Sbjct: 75 IDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRG 134
Query: 517 VMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIA 648
VM AV+ V +LK +SK VTTPEEIAQVATISANGDT +G LI+
Sbjct: 135 VMNAVEVVVAELKKISKKVTTPEEIAQVATISANGDTVVGNLIS 178
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 251 bits (615), Expect = 3e-67
Identities = 122/164 (74%), Positives = 141/164 (85%)
Frame = +1
Query: 157 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKG 336
R YAKDV+FGA+ R ML GV++LADAV+VTMGPKGRNVI+EQSWGSPKITKDGVTVAK
Sbjct: 15 RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKS 74
Query: 337 VELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRG 516
++LKDK+QN+GAKL+Q+VAN NEEAGDGTT ATVL RAIAKEGFE+ S N +EIRRG
Sbjct: 75 IDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIRRG 134
Query: 517 VMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIA 648
VM AV+ V +LK +SK VTTPEEIAQVATISANGDT +G LI+
Sbjct: 135 VMNAVEVVVAELKKISKKVTTPEEIAQVATISANGDTVVGNLIS 178
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 148 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 315
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 316 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 495
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 496 PIEIRRGVMLAVDAVKEKLKGMS 564
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 148 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 315
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 316 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 495
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 496 PIEIRRGVMLAVDAVKEKLKGMS 564
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 148 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 315
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 316 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 495
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 496 PIEIRRGVMLAVDAVKEKLKGMS 564
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +1
Query: 226 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 405
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 406 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK--PVTT 579
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 580 PEEIAQVATIS 612
E + + A S
Sbjct: 161 RERLVETAQTS 171
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +1
Query: 226 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 405
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 406 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK--PVTT 579
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 580 PEEIAQVATIS 612
E + + A S
Sbjct: 161 RERLVETAQTS 171
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +1
Query: 226 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 405
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 406 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK--PVTT 579
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 580 PEEIAQVATIS 612
E + + A S
Sbjct: 161 RERLVETAQTS 171
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Frame = +1
Query: 169 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 348
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 349 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLA 528
AK++ ++ + EAGDGTTT V+A A+ +SKG +P I A
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSA 139
Query: 529 VDAVKEKLKGMSKPVTTPEE--IAQVATISAN 618
++ L MS PV + + ++AT S N
Sbjct: 140 AAEAEKILDEMSSPVDLSNDALLNKMATTSLN 171
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Frame = +1
Query: 169 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 348
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 349 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLA 528
AK++ ++ + EAGDGTTT V+A A+ +SKG +P I A
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSA 139
Query: 529 VDAVKEKLKGMSKPVTTPEE--IAQVATISAN 618
++ L MS PV + + ++AT S N
Sbjct: 140 AAEAEKILDEMSSPVDLSNDALLNKMATTSLN 171
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +1
Query: 184 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 363
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E+ ++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73
Query: 364 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 543
K++ +A +EE GDGTT+ ++A + K E + + +P I G L A K
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL---ACK 130
Query: 544 EKLKGMSKPVT-TPEEIAQVATISANGDTAIGKLI 645
E +K +S+ ++ T + I + + ++A + K+I
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNAAKTSMSSKII 165
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +1
Query: 184 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 363
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E+ ++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73
Query: 364 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 543
K++ +A +EE GDGTT+ ++A + K E + + +P I G L A K
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL---ACK 130
Query: 544 EKLKGMSKPVT-TPEEIAQVATISANGDTAIGKLI 645
E +K +S+ ++ T + I + + ++A + K+I
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNAAKTSMSSKII 165
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 60.1 bits (139), Expect = 1e-09
Identities = 36/147 (24%), Positives = 72/147 (48%)
Frame = +1
Query: 208 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 387
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 388 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 567
+A + + E GDGTT+ VLA I K+ I G +P + R + A + + L +
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEI 141
Query: 568 PVTTPEEIAQVATISANGDTAIGKLIA 648
+ E+ ++ + T KL++
Sbjct: 142 KINGETELREM-LVKCAATTLSSKLVS 167
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 60.1 bits (139), Expect = 1e-09
Identities = 36/147 (24%), Positives = 72/147 (48%)
Frame = +1
Query: 208 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 387
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 388 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 567
+A + + E GDGTT+ VLA I K+ I G +P + R + A + + L +
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEI 141
Query: 568 PVTTPEEIAQVATISANGDTAIGKLIA 648
+ E+ ++ + T KL++
Sbjct: 142 KINGETELREM-LVKCAATTLSSKLVS 167
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 47.2 bits (107), Expect = 1e-05
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Frame = +1
Query: 184 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 363
G V+ + +AD + ++GP+ +L G +T DG + + + +K
Sbjct: 21 GHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHP--- 77
Query: 364 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV-DAV 540
AK + +A +EE GDGTT+ +LA + + + +P I + A+ D +
Sbjct: 78 -AAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMI 136
Query: 541 KEKLKGMSKPV--TTPEEIAQVATISANGDTAIGK 639
+ SK V T EIA+V S G I K
Sbjct: 137 QWSENKFSKTVDITDDAEIAKVVK-SCLGTKMISK 170
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/130 (23%), Positives = 56/130 (43%)
Frame = +1
Query: 202 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 381
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 382 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGM 561
+ ++ GDGTT+ +L + K+ + +G +P + G A E L+
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKF 137
Query: 562 SKPVTTPEEI 591
K ++
Sbjct: 138 KKEAPVERDL 147
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/130 (23%), Positives = 56/130 (43%)
Frame = +1
Query: 202 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 381
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 382 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGM 561
+ ++ GDGTT+ +L + K+ + +G +P + G A E L+
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKF 137
Query: 562 SKPVTTPEEI 591
K ++
Sbjct: 138 KKEAPVERDL 147
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 350 SLSSTPLATVTPSFVIFGDPQDCSRITFLPFGPIVTATASARMST 216
S + P TVTP V + D + +P PIVT T +A ST
Sbjct: 610 SSPTVPTTTVTPEVVREDEDYDYTNEFAIPNEPIVTTTTTAIAST 654
>Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical
protein R11G10.2 protein.
Length = 576
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 268 NVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKL 378
N+++ WG P++ +DG + EL++ ++ GA+L
Sbjct: 259 NLMISSEWGHPRLLRDGFMPS---ELENVSESFGARL 292
>AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical
protein W06H8.2 protein.
Length = 453
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 8/120 (6%)
Frame = +1
Query: 256 PKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTA 435
P ++ S + +G TV +E+ ++NIG V+ + A +
Sbjct: 238 PASTGFLIGLKTNSVEFQSEGTTVDDAIEMCRAYENIGFDFVELSGGTYEQLAFQHLKES 297
Query: 436 TVLARAIAKEGFEKISK-GANPIEIRRGVMLAVDAVKEKLK-------GMSKPVTTPEEI 591
T A E EKI N + G V+A+ E +K G+ +P+T ++
Sbjct: 298 TKRREAFFLEFAEKIRPVFKNTVVYLTGGFRTVNAMVEAIKSGATQGIGLGRPITAEPDL 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,023,867
Number of Sequences: 27780
Number of extensions: 244236
Number of successful extensions: 799
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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