Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_E12
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1022 - 8064032-8064657,8064823-8064893,8065926-8066047,806... 31 0.60
10_01_0236 + 2486371-2486952 30 1.4
03_02_0865 - 11895257-11895340,11896004-11896069,11896297-118963... 30 1.8
06_01_0351 + 2537022-2538281 29 2.4
12_02_0674 - 21745321-21746223,21746229-21747608 29 4.2
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 4.2
07_03_1721 - 29023979-29025295 28 5.6
03_06_0744 + 35910512-35910569,35911145-35911325,35912332-359124... 28 5.6
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 28 5.6
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 28 7.4
12_01_0919 - 9086879-9087064,9087842-9087923,9088357-9089553,908... 28 7.4
05_06_0218 + 26475951-26476252,26476361-26476522,26476769-26476970 28 7.4
05_03_0035 - 7592177-7592938 28 7.4
05_03_0033 - 7585267-7586028 28 7.4
11_02_0012 - 7346282-7347136,7347234-7347593 27 9.8
07_01_0695 + 5251802-5253016 27 9.8
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 27 9.8
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 9.8
01_01_0237 - 1972699-1972796,1973618-1974334,1975387-1976191 27 9.8
>01_01_1022 -
8064032-8064657,8064823-8064893,8065926-8066047,
8066540-8066689,8067153-8067179,8067485-8067552,
8067679-8067874
Length = 419
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 275 RQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSNSISFDESQETFSMDL 436
+Q P Q Q P A P+ P A A QKP S+S++E + FS+ +
Sbjct: 8 QQQPQQQQEQQ---PVAAAAVPTPAPPASEAQPQKPTRVSLSYEEISKLFSLPI 58
>10_01_0236 + 2486371-2486952
Length = 193
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = +2
Query: 98 RHLSRGRPPTANRFLQGRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLR 277
R L+ PP R +QG P+ P Y++ ++YS+ + Y +
Sbjct: 21 RRLAVAPPPPPRRSIQGSFTFAAPSPPPFQYTTYEAASLYSSLSLPLHLPYTYYAAAAAA 80
Query: 278 QSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRS 388
+P + TP LP L P S + +KPR+
Sbjct: 81 SAPATATP---LLPRMLPPLPPSATVVR-RRIKKPRT 113
>03_02_0865 -
11895257-11895340,11896004-11896069,11896297-11896355,
11896470-11896557,11897158-11897328,11897406-11897564,
11897653-11897835,11897931-11898012,11898753-11898959,
11899099-11899170,11901948-11902055,11902460-11902506
Length = 441
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 281 SPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSNSISFDESQ 415
+P P LP+ + P P QP++ KP +S DES+
Sbjct: 184 APFRMALPTPPLPSQVPAPPPPPPPPQPSAANKPHLTDLSSDESE 228
>06_01_0351 + 2537022-2538281
Length = 419
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/72 (29%), Positives = 27/72 (37%)
Frame = +2
Query: 119 PPTANRFLQGRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQT 298
PP L+G IT P + PG + + G ++ MLSL T
Sbjct: 88 PPLPWLLLRGGAFITLPDGAAHRLPAVPGDATHLASTGSGLLIVHGDGMLSLMNPSSLAT 147
Query: 299 PPQCALPAALLK 334
P AL A L K
Sbjct: 148 TPLAALAAVLPK 159
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +2
Query: 149 RVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAAL 328
R L T ++P + P T S P R + +LS S I TP C L A
Sbjct: 515 RELSTATGKIPSTPRTNPLSTATSKIPSTPR-----TSLLSSSTSKIPSTPSTCELSTAT 569
Query: 329 LKNPSSVPNAQPASTQKPRSNS 394
K PS+ + P ST +++S
Sbjct: 570 GKIPSTTCTS-PLSTATGKTSS 590
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = +2
Query: 158 ITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKN 337
+T P+ +P +P IYS T + I S + S S T P + P + + N
Sbjct: 1629 LTSPSYVPTSLPHSPTSPIYSAT---SPIYSPSSPIYSPTSLSYSPTSPVYS-PTSPVYN 1684
Query: 338 PSSVPNAQPASTQKPRSNSISFDESQETFS 427
P+S + + + P S S S+ + ++S
Sbjct: 1685 PTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1714
>07_03_1721 - 29023979-29025295
Length = 438
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 227 PGGTRIVYERSFMLSLRQSPISQTP--PQCALPAALLKNPSSVPNAQPASTQKPRS 388
P G +Y+ S + + P P C A++LK NA+P ST +PR+
Sbjct: 142 PAGDAPLYQLSIKGDQTATAVKFAPDSPLCNSMASVLKIGEQSKNAKPTSTAQPRN 197
>03_06_0744 +
35910512-35910569,35911145-35911325,35912332-35912419,
35912541-35912726,35913591-35913725,35913803-35913862,
35914609-35914698,35915384-35915515,35916039-35916183,
35916266-35916439,35916629-35916692,35916778-35916847,
35917328-35917445,35918258-35918280,35918398-35918499,
35919831-35920250,35920327-35920563
Length = 760
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +2
Query: 101 HLSRGRPPTANRFLQGRVLITDPAQMPDVYSSTPGGT----IYSTTPGGTRIVYERSFML 268
HL P + R + ++L + +P ++SS+P G+ ++ + G R F
Sbjct: 307 HLVHATPYESLREIAMKILQNGVSTVPIMFSSSPDGSYPQLLHLASLSGILKCICRYFKN 366
Query: 269 SLRQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSN 391
S PI + P C +P PN +P + +P ++
Sbjct: 367 SQGNLPI-LSQPVCTIPLGTWVPKIGDPNGRPLAMLRPNTS 406
>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
Length = 637
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +2
Query: 302 PQCALPAALLKNPSSVP------NAQPASTQKPRSNSISFDESQETFSMDL 436
P+ LPA N SSVP NAQP+S KP S+S Q S++L
Sbjct: 59 PRARLPATTSAN-SSVPRTTGSSNAQPSSETKPASSSSDAKLEQHEKSLNL 108
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 167 PAQMPDV-YSSTP--GGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKN 337
PAQ D YSS P GGT Y + PGG S+ ++ TP C++P +L++
Sbjct: 472 PAQPVDTGYSSYPPYGGTSYGSPPGGAGPHNGGSY------GAVTGTP--CSMPVHVLQD 523
Query: 338 PSS 346
P +
Sbjct: 524 PGT 526
>12_01_0919 -
9086879-9087064,9087842-9087923,9088357-9089553,
9089598-9089961,9090086-9090188,9090234-9090479
Length = 725
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 275 RQSPISQTPPQCALPAALLKNPSSVPN 355
+++P+ Q PP+ A+PA ++ P VPN
Sbjct: 529 KENPVLQVPPEIAVPAVAMEIP--VPN 553
>05_06_0218 + 26475951-26476252,26476361-26476522,26476769-26476970
Length = 221
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +2
Query: 227 PGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPS-----SVPNAQPASTQKPRSN 391
P G++ F + + P ALP N + +VP PA+ ++PR+
Sbjct: 62 PSGSQFDISEFFFDDAPPAAVFNGAPTAALPDGAAANATRSAAEAVPAPAPAAVERPRTE 121
Query: 392 SISFDESQETFSMD 433
I+F E +D
Sbjct: 122 RIAFRTKSEIEILD 135
>05_03_0035 - 7592177-7592938
Length = 253
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 341 SSVPNAQPASTQKPRSNSIS 400
SS P A+PAS Q+P+S+S S
Sbjct: 54 SSEPEAKPASQQEPKSDSYS 73
>05_03_0033 - 7585267-7586028
Length = 253
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 341 SSVPNAQPASTQKPRSNSIS 400
SS P A+PAS Q+P+S+S S
Sbjct: 54 SSEPEAKPASQQEPKSDSYS 73
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 363 RPAHKNLDLTRYHSTSRRKPSAWISK 440
+PA++ D R +SR+K + W+SK
Sbjct: 109 KPAYRAADFQRQPKSSRKKINKWVSK 134
>07_01_0695 + 5251802-5253016
Length = 404
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 265 HERPFVHYSCTSRSGGVDGSARCAGIDIRHLS 170
H P+V + + G DG C G+DI LS
Sbjct: 68 HPGPYVAACFSDEADGGDGDESCGGVDIVDLS 99
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +2
Query: 266 LSLRQSPISQTPPQCALPAALLKNPSSVPNAQPASTQKPRSNSISFDESQETFSMDL*AS 445
LS++ PIS + + N S P+ QP S +S +E FS+ S
Sbjct: 474 LSIKLDPISNSRININSASGRASNDSQAPSVQPQKCGPVDSTVVSMALKREQFSIPSMCS 533
Query: 446 H*FSEY 463
FS +
Sbjct: 534 ESFSSH 539
>01_06_0343 + 28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.5 bits (58), Expect = 9.8
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 125 TANRFLQGRVLITDPAQMPDVYSSTPGGTIYSTT-PGGTRIVYERSFMLSLRQSPISQTP 301
T+N L+ + + DPA+M V + P GT+ STT P +R Y S + S S P
Sbjct: 1065 TSNSSLKLLLPLADPAEMLRV-PAIPVGTLLSTTYPISSRAPYILSLLRSQISSKDMMDP 1123
Query: 302 PQCALPAALLKNPSSVP 352
L +L N +VP
Sbjct: 1124 D--LLSKLVLNNFCTVP 1138
>01_01_0237 - 1972699-1972796,1973618-1974334,1975387-1976191
Length = 539
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +2
Query: 191 SSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNAQPAS 370
SS G T + +P +V+ + S RQ PIS P CA KN SS A A
Sbjct: 366 SSDLGLTQFKISPINRELVFLYNCSQSRRQLPISWAPVSCA------KNESSNSYAWLAG 419
Query: 371 TQKP 382
KP
Sbjct: 420 KYKP 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,602,025
Number of Sequences: 37544
Number of extensions: 426950
Number of successful extensions: 1310
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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