Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_E12
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z73908-5|CAA98129.2|  325|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    31   0.94 
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      31   0.94 
Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 22/74 (29%), Positives = 33/74 (44%)
 Frame = +2

Query: 179 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 358
           P+   + PG T       GT  V ++  M    QS  S  PP+      + + P+ VP  
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418

Query: 359 QPASTQKPRSNSIS 400
            PA+  +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432


>Z73908-5|CAA98129.2|  325|Caenorhabditis elegans Hypothetical
           protein F53B2.4 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +1

Query: 502 SLRMFRLLCLLDVCGLFVKLARAKHNKKTCLTGHHFLFRSLVAL*KLIS 648
           +L ++ LLC++    L +KL + K+N+K+ +     L  SL  L  L+S
Sbjct: 210 NLAIWLLLCIISNLTLLIKLKKLKNNRKSAILQRAELSLSLTTLSMLLS 258


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 22/74 (29%), Positives = 33/74 (44%)
 Frame = +2

Query: 179 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 358
           P+   + PG T       GT  V ++  M    QS  S  PP+      + + P+ VP  
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418

Query: 359 QPASTQKPRSNSIS 400
            PA+  +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 22/74 (29%), Positives = 33/74 (44%)
 Frame = +2

Query: 179 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 358
           P+   + PG T       GT  V ++  M    QS  S  PP+      + + P+ VP  
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418

Query: 359 QPASTQKPRSNSIS 400
            PA+  +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432


>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = +2

Query: 167 PAQMPDVYSSTPGGTIYSTTPGGTRI-VYERSFMLSLRQSPISQTPPQCALPAALLKN-- 337
           P+Q P      P  T  +  P   +I V ++    S + SP  Q  PQ + P A      
Sbjct: 197 PSQSPQGSPQLPTQTTTTNAPIKIKIQVQQQQPQQSPQNSPQQQAQPQASQPIAQTTQTI 256

Query: 338 PSSVPNAQP 364
           P+S+P A P
Sbjct: 257 PASIPQAAP 265


>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +2

Query: 269 SLRQSPISQTPPQCALPAALLK---NPSSVPNAQPASTQKPRSNSISFDESQETFSMD 433
           SL  S    TP Q     + L+   +PS +P+  PA   KPR + +S   S   F  D
Sbjct: 255 SLASSDAPATPDQNKSDNSSLRQTPSPSVLPSPVPAPMAKPRESVVSMANSTNPFDDD 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,384,659
Number of Sequences: 27780
Number of extensions: 341835
Number of successful extensions: 951
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)