Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_E06
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 101 5e-22
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 83 2e-16
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 71 6e-13
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 68 6e-12
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 60 9e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 60 9e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 60 9e-10
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 49 3e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 47 9e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 47 9e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 47 9e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 45 5e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 45 5e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 45 5e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 44 8e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 44 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 44 1e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 41 6e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 39 0.002
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 39 0.002
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 39 0.003
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 39 0.003
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 39 0.003
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 39 0.003
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 37 0.013
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 37 0.013
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 36 0.029
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 36 0.029
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 34 0.089
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 31 0.48
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 31 0.48
U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC084152-5|AAK39311.1| 132|Caenorhabditis elegans Hypothetical ... 30 1.5
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 1.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 101 bits (241), Expect = 5e-22
Identities = 46/107 (42%), Positives = 65/107 (60%)
Frame = +1
Query: 280 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFD 459
G LR W L P +KDFY + V +R + +++ W S N++TL+GR +P+P F+
Sbjct: 74 GGRLRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFN 133
Query: 460 EAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
EA P + E+ F KPT IQ+ WPIA+SG D++ IA TGSGK
Sbjct: 134 EAPLPGQI-HELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGK 179
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 82.6 bits (195), Expect = 2e-16
Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Frame = +1
Query: 322 KPFKKDFYVPHLDVEKRPESDVEAWRSE-NEITLKGRNIPKPTLTFDEAGFPDYVMDEID 498
+ FKK+FY+ ++ + +++V+A+R E + IT+KG + PKP T+ + G +M+ +
Sbjct: 261 RKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLK 320
Query: 499 KMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
K ++KPT IQAQ P +SG D++GIA TGSGK
Sbjct: 321 KFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGK 354
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 78.6 bits (185), Expect = 3e-15
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +1
Query: 358 DVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQ 537
++ + + D +R + I++KG +P+P ++EAGFPD V + ++G+ +PTPIQ Q
Sbjct: 271 ELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQ 330
Query: 538 GWPIALSGHDMVGIASTGSGK 600
PI L D++G+A TGSGK
Sbjct: 331 AIPIGLQNRDVIGVAETGSGK 351
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/91 (39%), Positives = 52/91 (57%)
Frame = +1
Query: 328 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 507
F K+FY H D+++ DV ++ + + G P+P +F F +M+ I K
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 508 FAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+ +PTPIQA P ALSG D++GIA TGSGK
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGIAKTGSGK 315
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 70.9 bits (166), Expect = 6e-13
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 361 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKM-GFAKPTPIQAQ 537
+ ++ + D E R I+ +G +IP P +F E FP +++ + K G PT IQ Q
Sbjct: 160 IRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQ 219
Query: 538 GWPIALSGHDMVGIASTGSGK 600
G P+ALSG DM+GIASTGSGK
Sbjct: 220 GIPVALSGRDMIGIASTGSGK 240
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 67.7 bits (158), Expect = 6e-12
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Frame = +1
Query: 307 DLSRLKPFKKDFY-VPHLDVEKRPESDVEAWRS---------ENEITLKGRNIPKPTLTF 456
+ S +KP +D Y +P+ PE E + + E T+K IP P +F
Sbjct: 29 NFSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVK---IPPPVNSF 85
Query: 457 DEA-GFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
++A G +M EI K GF KP+PIQ+Q WP+ LSG D +G++ TGSGK
Sbjct: 86 EQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGK 134
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 370 RPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWP 546
R +S + + EN + + G ++P F+EAGF VM+ +++ G++KPTP+Q P
Sbjct: 112 RTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIP 171
Query: 547 IALSGHDMVGIASTGSGK 600
L+ D++ A TGSGK
Sbjct: 172 TLLANRDLMSCAQTGSGK 189
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 370 RPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWP 546
R +S + + EN + + G ++P F+EAGF VM+ +++ G++KPTP+Q P
Sbjct: 96 RTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIP 155
Query: 547 IALSGHDMVGIASTGSGK 600
L+ D++ A TGSGK
Sbjct: 156 TLLANRDLMSCAQTGSGK 173
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 370 RPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWP 546
R +S + + EN + + G ++P F+EAGF VM+ +++ G++KPTP+Q P
Sbjct: 93 RTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIP 152
Query: 547 IALSGHDMVGIASTGSGK 600
L+ D++ A TGSGK
Sbjct: 153 TLLANRDLMSCAQTGSGK 170
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 403 ENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIA 582
E + G ++P+P F + +++ + I G+ +PTP+Q P G D++ A
Sbjct: 151 EIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCA 210
Query: 583 STGSGK 600
TGSGK
Sbjct: 211 QTGSGK 216
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +1
Query: 358 DVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQ 537
DVEKR + ++ R N I G ++P L F ++ +++ + + +P+PIQ Q
Sbjct: 96 DVEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQ 155
Query: 538 GWPIALSGHDMVGIASTGSGK 600
P +++ A TGSGK
Sbjct: 156 SIPFMTERRNVLASAPTGSGK 176
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
KP TF EA + + + G++K TPIQ P+ G+D++ A TGSGK
Sbjct: 338 KPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
KP TF EA + + + G++K TPIQ P+ G+D++ A TGSGK
Sbjct: 338 KPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
KP TF EA + + + G++K TPIQ P+ G+D++ A TGSGK
Sbjct: 338 KPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 451 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+F E G + D ++G+ KP+ IQ P AL G D++G+A TGSGK
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGK 94
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
K TF EA + + + G+ K TPIQ P+ GHD++ A TGSGK
Sbjct: 549 KTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
K TF EA + + + G+ K TPIQ P+ GHD++ A TGSGK
Sbjct: 549 KTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
K TF EA + + + G+ K TPIQ P+ GHD++ A TGSGK
Sbjct: 549 KTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 454 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+ + G V I+K GF +PTPIQ + P + G D+V ++ TGSGK
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 454 FDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+ + G V I+K GF +PTPIQ + P + G D+V ++ TGSGK
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+P +F ++ P + +++ G+ + TPIQ P+ G D++ A TGSGK
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 439 KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+P +F ++ P + +++ G+ + TPIQ P+ G D++ A TGSGK
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +1
Query: 472 PDYVMDEIDKMGFAKPTPIQAQGWPIAL-SGHDMVGIASTGSGK 600
P+ V++ I++MGF++PT IQ+ P A+ D++G A TGSGK
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGK 206
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 448 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
++F++ ++ G++ PTPIQ P+AL+G D+ A+TG+GK
Sbjct: 148 VSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGK 198
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 409 EITLKGRNIP-KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAS 585
E+ +G +I + TF+ ++ + F +P+P+QA+ P+ L G DM+ A
Sbjct: 8 EVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAK 67
Query: 586 TGSGK 600
+G+GK
Sbjct: 68 SGTGK 72
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 409 EITLKGRNIP-KPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIAS 585
E+ +G +I + TF+ ++ + F +P+P+QA+ P+ L G DM+ A
Sbjct: 8 EVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAK 67
Query: 586 TGSGK 600
+G+GK
Sbjct: 68 SGTGK 72
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 451 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
TFD+ G + ++ I GF KP+ IQ + P L D++ A +G+GK
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGK 76
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 451 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
TFD+ G + ++ I GF KP+ IQ + P L D++ A +G+GK
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGK 76
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 445 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
T F + G ++ ++ M TP+QA P L G D++G A TG+GK
Sbjct: 88 TKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 445 TLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
T F + G ++ ++ M TP+QA P L G D++G A TG+GK
Sbjct: 88 TKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 472 PDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
P + D + +M +PTPIQ + + G+D+V A TGSGK
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGK 786
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 472 PDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
P + D + +M +PTPIQ + + G+D+V A TGSGK
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGK 786
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 35.5 bits (78), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 448 LTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
L F++ ++ + + KPT IQ +L+G D+VG A TGSGK
Sbjct: 76 LRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGK 126
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 35.5 bits (78), Expect = 0.029
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +1
Query: 388 EAWRSENEITLKGRNIPKPTLTFDEAG--FPDYVMDE-----IDKMGFAKPTPIQAQGWP 546
E W++ + K R +T D G F D+ + I + G+ KP+PIQ
Sbjct: 17 ENWKAGLNLPAKDRRFKTADVT-DTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIG 75
Query: 547 IALSGHDMVGIASTGSGK 600
+AL+G D++ A G+GK
Sbjct: 76 VALTGQDILARAKNGTGK 93
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +1
Query: 364 EKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGW 543
E+ E + + E+ T + K T E ++ + +GF T IQA+
Sbjct: 40 EEEVEEEQKHQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSI 99
Query: 544 PIALSGHDMVGIASTGSGK 600
L G D++ A TGSGK
Sbjct: 100 DPLLEGKDVLASAKTGSGK 118
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 451 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+FD+ + ++ I GF KP+ IQ + +G D++ A +G+GK
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 451 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
+FD+ + ++ I GF KP+ IQ + +G D++ A +G+GK
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical
protein C28G1.2 protein.
Length = 265
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 552 SNRPTLGLNGCRLSKPHFIYFIHNIIWKTSLIKSKCWFWYISTFQSNFI 406
S R G+N R + P+ + N W+ L + + W +Y S + S I
Sbjct: 76 SVRADSGINDVRRNSPNQTRILFNAGWEEKLHEKRSWLFYPSKYNSKVI 124
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 451 TFDEAGFPDYVMDEIDKMGFAKPTPIQAQGWPIALSGHDMVGIASTGSGK 600
++ +G +++ + ++ + IQ P L GHD++G A T +GK
Sbjct: 382 SWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGK 431
>AC084152-5|AAK39311.1| 132|Caenorhabditis elegans Hypothetical
protein Y102A11A.5 protein.
Length = 132
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 322 KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPD 477
K + D VP L + P ++AW+ E + +KG+N + F G+ D
Sbjct: 36 KKIRIDLLVPSLSIMSDPVI-LDAWKHEKSVHIKGKNCEQKPWVFMIYGWQD 86
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 217 NEGFCYGCDSYFGFEIDC 164
NE FCYG DS+ G I C
Sbjct: 358 NEEFCYGFDSFIGTVISC 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,444,641
Number of Sequences: 27780
Number of extensions: 224989
Number of successful extensions: 539
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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