Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_E05
         (437 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0377 + 16481232-16481361,16482501-16482547,16482634-164827...    28   2.9  
04_04_0808 - 28196563-28196735,28197369-28197440,28197540-281976...    28   3.8  
03_01_0104 - 830884-831282,831511-832205,832368-833387,833570-83...    27   5.0  
08_02_0488 + 17706902-17706989,17707112-17707158,17707244-177073...    27   6.6  
07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485,115...    27   6.6  
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272...    27   6.6  
07_03_0224 + 15385572-15385747,15386311-15386383,15387310-153876...    27   8.7  

>08_02_0377 +
           16481232-16481361,16482501-16482547,16482634-16482711,
           16482826-16482896,16483005-16483086
          Length = 135

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 338 HKRRTICSDHLRPEQTGYVLLTPIEKTRQI 249
           H    I SD+  PE TGY LL  ++K+ ++
Sbjct: 61  HDVNMIVSDYCMPEMTGYDLLMEVKKSPRL 90


>04_04_0808 -
           28196563-28196735,28197369-28197440,28197540-28197666,
           28198362-28198430,28198517-28198583,28198751-28198872,
           28199302-28199412,28199596-28199661,28200156-28200213,
           28200307-28200343,28200420-28200513,28200967-28201032,
           28201139-28201203,28201352-28201496,28201925-28202074,
           28202266-28202335,28202752-28202828,28202919-28202987,
           28203798-28203881,28204018-28204061,28204172-28204273,
           28204420-28204618,28204672-28204727,28204886-28204958,
           28205685-28205771,28205863-28205976,28206985-28207092,
           28207183-28207278,28207722-28207787,28208130-28208222,
           28208429-28208512,28208961-28209078,28209191-28209267,
           28209459-28209641,28210542-28210636,28210903-28211053,
           28212218-28212325,28212513-28212612,28212788-28212840,
           28214022-28214102
          Length = 1269

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 308 DGHCIWYGVCANSTEH*MMNC 370
           +G+C  YG+CA  ++  ++NC
Sbjct: 50  EGYCSMYGICAQRSDGKVLNC 70


>03_01_0104 -
           830884-831282,831511-832205,832368-833387,833570-833696,
           834342-834709,834780-835059,835137-835466
          Length = 1072

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 308 DGHCIWYGVCANSTEH*MMNCSMMDPLNRSKKR 406
           D HC+W     NS E  M+ C + D    S K+
Sbjct: 476 DRHCLWEVPLVNSVERVMVYCGLHDNPKVSMKK 508


>08_02_0488 +
           17706902-17706989,17707112-17707158,17707244-17707321,
           17707436-17707506,17707616-17707697
          Length = 121

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 338 HKRRTICSDHLRPEQTGYVLLTPIEKTRQI 249
           H    I SD+  P+ TGY LL  ++K+ ++
Sbjct: 47  HDVNMIVSDYCMPDMTGYDLLMEVKKSPKL 76


>07_01_0163 +
           1149466-1150593,1150733-1150937,1151453-1151485,
           1152244-1153646
          Length = 922

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -1

Query: 356 NVLCCSHKRRTIC-SDHLRPEQTGYVLLTP-IEKTRQIEIVAKNFRDQPSFI 207
           N LCC H  + +C S +L   +   + L P IE +   ++    FR+Q + +
Sbjct: 288 NPLCCKHHGQKVCGSGNLHKVELTDISLEPIIEVSLLCQVSPPGFREQGTIV 339


>01_06_1795 -
           39925019-39926029,39926265-39926408,39927200-39927277,
           39927722-39927838,39927925-39927981,39928492-39928623,
           39928725-39928922,39929364-39929474,39929570-39929785,
           39929879-39930064,39930590-39931192
          Length = 950

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -1

Query: 80  INYLSDIT-HHYRAQLASRKLEI 15
           I Y+ +IT HHY+ ++ASR +E+
Sbjct: 403 IEYMINITDHHYKTEIASRCVEL 425


>07_03_0224 +
           15385572-15385747,15386311-15386383,15387310-15387658,
           15387814-15387860,15387948-15388025,15388328-15388398,
           15388514-15388601
          Length = 293

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = -1

Query: 323 ICSDHLRPEQTGYVLLTPIEKT---RQIEIVAKNFRDQPSFI 207
           I +D+  PE TGY LL  I+++   +QI +V  +  + P+ I
Sbjct: 222 IITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRI 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,518,611
Number of Sequences: 37544
Number of extensions: 153418
Number of successful extensions: 348
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)