Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_E05
         (437 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88314-2|AAF99884.2|  461|Caenorhabditis elegans Let-23 fertilit...    27   6.0  
AF045613-1|AAC38962.1|  461|Caenorhabditis elegans inositol tris...    27   6.0  
Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical pr...    27   7.9  
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family...    27   7.9  

>U88314-2|AAF99884.2|  461|Caenorhabditis elegans Let-23 fertility
           effector/regulatorprotein 2, isoform c protein.
          Length = 461

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 334 LCEQHRTLNDELFYDGPAKPIEEKAMKIIE--PY 429
           +C+   T+N E     P+ P +E+ M+II   PY
Sbjct: 74  VCDHRDTMNSEASSSPPSAPTQERLMQIISCFPY 107


>AF045613-1|AAC38962.1|  461|Caenorhabditis elegans inositol
           trisphosphate 3-kinaseform 3 protein.
          Length = 461

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 334 LCEQHRTLNDELFYDGPAKPIEEKAMKIIE--PY 429
           +C+   T+N E     P+ P +E+ M+II   PY
Sbjct: 74  VCDHRDTMNSEASSSPPSAPTQERLMQIISCFPY 107


>Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 225 AEVFCDDFYLPCFF 266
           +EVFCD F L C+F
Sbjct: 135 SEVFCDKFILQCYF 148


>Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 225 AEVFCDDFYLPCFF 266
           +EVFCD F L C+F
Sbjct: 135 SEVFCDKFILQCYF 148


>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
            protein 3 protein.
          Length = 3343

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 284  VLLTPIEKTRQIEIVAKNF 228
            +L TP+E+T QI+I  +NF
Sbjct: 2536 ILKTPLEETMQIDIFGQNF 2554


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,752,166
Number of Sequences: 27780
Number of extensions: 152599
Number of successful extensions: 391
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)