Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_E03
(379 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0470 - 10700092-10700505 83 7e-17
10_08_0951 - 21769342-21769752 81 2e-16
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 39 0.001
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210... 30 0.69
11_01_0555 - 4388977-4389528 29 1.2
10_07_0138 + 13325418-13325954 29 1.2
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 29 1.2
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 29 1.2
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 1.6
02_02_0047 + 6369566-6369661,6369857-6369916,6370320-6370385 29 1.6
05_04_0110 + 18058821-18058900,18059119-18059182,18059351-180594... 28 2.1
10_01_0223 - 2390720-2390749,2390810-2391093,2391183-2391435 27 6.5
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 27 6.5
07_03_0836 - 21856808-21858451,21858600-21859487,21860019-21860048 27 6.5
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042 27 6.5
01_05_0202 + 19238425-19239272,19239356-19239586,19239688-19239883 27 6.5
09_03_0139 + 12692844-12694982 26 8.6
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 26 8.6
06_01_0064 + 542101-542291,542391-542453,542559-542675,542763-54... 26 8.6
>02_02_0470 - 10700092-10700505
Length = 137
Score = 83.0 bits (196), Expect = 7e-17
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +1
Query: 91 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKSAQEDGKE 270
M K +KPGK V++L GRYAGRKA++V+ ++EGT D+PYGH VAG+ +YP+K ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 271 *NPQEVQDKAF 303
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
Score = 47.6 bits (108), Expect = 3e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 239 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 355
P KV ++ K K+S++K F+K+VN+ H+MPTRYT+D
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLD 88
>10_08_0951 - 21769342-21769752
Length = 136
Score = 81.4 bits (192), Expect = 2e-16
Identities = 33/71 (46%), Positives = 52/71 (73%)
Frame = +1
Query: 91 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKSAQEDGKE 270
M K +KPGK V++L GR+AGRKA++V+ ++EGT D+PYGH VAG+ +YP+K ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 271 *NPQEVQDKAF 303
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 239 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 355
P KV ++ K K+S++K F+K+VN+ HLMPTRYT+D
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLD 88
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 38.7 bits (86), Expect = 0.001
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +1
Query: 70 KRTNPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 186
++ NP+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 64 RKANPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>08_02_1046 -
23919990-23920183,23920251-23920479,23920624-23921057,
23921426-23921567,23922163-23922255,23923132-23923245,
23924181-23924266,23924458-23924506,23924717-23924783,
23925550-23925665,23925698-23925821,23926465-23926553,
23926810-23927061
Length = 662
Score = 29.9 bits (64), Expect = 0.69
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 141 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPEKCTRG 260
V G+ G + ++RR+L QA+ + +R R PP RG
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARG 63
>11_01_0555 - 4388977-4389528
Length = 183
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 111 G*SSAGLKWPVRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPEKCTRGWERIKS 278
G +A +W V + YR LRRR L +R+C R V P + RG+ER+++
Sbjct: 132 GSDAAAQEWLVDQVRVYRDA-LRRRTLAGRLRSCCRA----VMPSRRPRGYERLQT 182
>10_07_0138 + 13325418-13325954
Length = 178
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 153 QGYRSQELRRRYLRQAVRACFRRWYRQVPPEKCTRGWERI 272
+G R R R R+ C RRW R +C+R W R+
Sbjct: 82 RGARRCSRRWRRSRRWRSRCSRRWRRSWRRRRCSRRWRRL 121
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 376 LNFSXAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHFS 242
L + E + WH++I YNL + +YL + D V+FS
Sbjct: 307 LTQTLTEEEFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYFS 351
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 376 LNFSXAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHFS 242
L + E + WH++I YNL + +YL + D V+FS
Sbjct: 305 LTQTLTEEEFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYFS 349
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 91 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 186
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>02_02_0047 + 6369566-6369661,6369857-6369916,6370320-6370385
Length = 73
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 177 RRRYLRQAVRACFRRWYRQVPPEKCTRGWE 266
RRR L ++ CF+ WY + + C+ G E
Sbjct: 30 RRRVLYYRMKPCFQIWYETIRIQLCSTGVE 59
>05_04_0110 +
18058821-18058900,18059119-18059182,18059351-18059437,
18059521-18059598,18060105-18060201,18060817-18060860,
18061071-18061257,18061324-18061406
Length = 239
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 350 LYNVLASSDYSLQPSRKALSWT 285
+YN L SSD S + SRK WT
Sbjct: 46 IYNALTSSDQSSKESRKMALWT 67
>10_01_0223 - 2390720-2390749,2390810-2391093,2391183-2391435
Length = 188
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 134 LKTSTTLPGFIILPILEGFVRF*LIFKPILWIF 36
L+T LP F++ P+ +G++ + + PI+ +F
Sbjct: 44 LRTPVDLPDFLVFPMEDGWLGYAGMMGPIIRVF 76
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 137 AGTRVARLS*SRITTKVPPTSRTGMLSSLVS 229
AG+ ARL+ R+ T PP RT L+ V+
Sbjct: 173 AGSPAARLAARRLRTSPPPRLRTSRLAGAVA 203
>07_03_0836 - 21856808-21858451,21858600-21859487,21860019-21860048
Length = 853
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 95 PILEGFVRF*LIFKPILWIFRDYVY 21
P+ F+ F L+F P++WIFR Y
Sbjct: 622 PVTSVFLLFYLLF-PVIWIFRGIFY 645
>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
Length = 819
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 376 LNFSXAEVNCITCWHQVIIVYNLHERLYL 290
+N EV T W +I YNLH ++L
Sbjct: 386 INDYEEEVEFFTAWEAMISKYNLHNNVWL 414
>01_05_0202 + 19238425-19239272,19239356-19239586,19239688-19239883
Length = 424
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 251 HKRMGKNKIHKRSKIKPFVKVVNYNHL 331
HKR+G + SK KPF+K++ ++ L
Sbjct: 298 HKRIGPESDDRTSKGKPFLKMMAFSPL 324
>09_03_0139 + 12692844-12694982
Length = 712
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 109 PGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAG 225
P V L+ G Y GRK +V Y S +G A AG
Sbjct: 527 PTLVQLIRDGAYRGRKNAMVSLYGLLQSAANHGRAIAAG 565
>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 GLKWPVRGSQGYRSQELRRRYLRQAVRACFRRWYRQ--VPP 242
G KW + + RS E +R ++ +A+R R + ++ +PP
Sbjct: 1000 GNKWDMCTKEHSRSNEFKRLFVPEAIRKLIRPYDKELSIPP 1040
>06_01_0064 +
542101-542291,542391-542453,542559-542675,542763-542892,
543010-543168,543839-543990,544313-544436,544629-544669,
545512-545757,546010-546126,546683-547097,548698-548849,
548960-549104
Length = 683
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 370 FSXAEVNCITCWHQVIIVYNLHERLYLGPLVDFIL 266
F+ A + I +I + LHE LYLG +V IL
Sbjct: 243 FTSAFIPIIQIMVAIIDFFYLHENLYLGSVVGSIL 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,477,479
Number of Sequences: 37544
Number of extensions: 218943
Number of successful extensions: 627
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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