BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_D19
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 p... 256 5e-68
BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 p... 256 5e-68
BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 p... 256 5e-68
BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 p... 256 5e-68
AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 p... 256 5e-68
AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens ... 256 5e-68
AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 p... 256 7e-68
AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L... 256 7e-68
BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 p... 254 2e-67
AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 p... 254 2e-67
L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 pro... 251 1e-66
BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2... 244 2e-64
BC081565-1|AAH81565.1| 145|Homo sapiens RPL15 protein protein. 140 3e-33
AB007173-1|BAA25833.1| 42|Homo sapiens ribosomal protein L15 p... 85 2e-16
AK123130-1|BAC85540.1| 142|Homo sapiens protein ( Homo sapiens ... 30 8.2
>BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 256 bits (627), Expect = 5e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 256 bits (627), Expect = 5e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 256 bits (627), Expect = 5e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 256 bits (627), Expect = 5e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 256 bits (627), Expect = 5e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens
clone TCBAP0781 mRNA sequence. ).
Length = 204
Score = 256 bits (627), Expect = 5e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15
pseudogene 3 protein.
Length = 204
Score = 256 bits (626), Expect = 7e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERVGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L15
protein.
Length = 204
Score = 256 bits (626), Expect = 7e-68
Identities = 122/192 (63%), Positives = 135/192 (70%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSLAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 254 bits (622), Expect = 2e-67
Identities = 122/192 (63%), Positives = 134/192 (69%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKS 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 254 bits (622), Expect = 2e-67
Identities = 122/192 (63%), Positives = 134/192 (69%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKAFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10
protein.
Length = 205
Score = 251 bits (615), Expect = 1e-66
Identities = 121/192 (63%), Positives = 133/192 (69%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRXLGKGHKY 607
V +DS+YK FEVIL+DP HKAIRR+P WI HKHREMRGLTSAGR SR LGKGHK+
Sbjct: 121 VGEDSTYKAFEVILIDPFHKAIRRNPDTQWITKPDHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 608 SQTKGGSRRAAW 643
T GGSRRAAW
Sbjct: 181 HHTIGGSRRAAW 192
>BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA
2510008H07 gene protein.
Length = 219
Score = 244 bits (598), Expect = 2e-64
Identities = 120/199 (60%), Positives = 133/199 (66%)
Frame = +2
Query: 47 RLPQAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGY 226
RL A + G QEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY
Sbjct: 9 RLAAARRKGKSCTPQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGY 68
Query: 227 RAKQXXXXXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXX 406
+AKQ ATYGKP HGVNQLK R+LQS+A
Sbjct: 69 KAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGAL 128
Query: 407 XXXXXYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRX 586
YWV +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SR
Sbjct: 129 RVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRG 188
Query: 587 LGKGHKYSQTKGGSRRAAW 643
LGKGHK+ T GGSRRAAW
Sbjct: 189 LGKGHKFHHTIGGSRRAAW 207
>BC081565-1|AAH81565.1| 145|Homo sapiens RPL15 protein protein.
Length = 145
Score = 140 bits (340), Expect = 3e-33
Identities = 70/125 (56%), Positives = 78/125 (62%)
Frame = +2
Query: 68 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 247
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 248 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAXXXXXXXXXXXXXXXXYW 427
ATYGKP HGVNQLK R+LQS+A YW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 428 VAQDS 442
+ S
Sbjct: 121 MESHS 125
>AB007173-1|BAA25833.1| 42|Homo sapiens ribosomal protein L15
protein.
Length = 42
Score = 85.0 bits (201), Expect = 2e-16
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +2
Query: 113 SDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 238
SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 SDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQ 42
>AK123130-1|BAC85540.1| 142|Homo sapiens protein ( Homo sapiens
cDNA FLJ41135 fis, clone BRACE2028970. ).
Length = 142
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 151 AVPSVDSYAPRSQAHKAGQSPKTRLPC*TRLCCIQNPCATWWPQA--SSC*G 300
A P V+S+ PR+Q H A P+T P T + + PC W + SSC G
Sbjct: 42 AHPQVESWVPRAQTHPA--PPQTWAPFFT-MHSSEQPCRQTWRASVLSSCEG 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,525,660
Number of Sequences: 237096
Number of extensions: 2186798
Number of successful extensions: 8236
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8222
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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