Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_D19
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.36 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.36 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.36 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 17  FYGLPVGHARRLPQAAKMGAYRY 85
           F+GLPVG    +P +     YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 17  FYGLPVGHARRLPQAAKMGAYRY 85
           F+GLPVG    +P +     YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 17  FYGLPVGHARRLPQAAKMGAYRY 85
           F+GLPVG    +P +     YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 21  TVYLWDTRDVCHRLLRW 71
           T+Y +D RD C    +W
Sbjct: 402 TIYKYDVRDGCRTPFQW 418


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 48  VCHRLLRWVPTDI 86
           VCH  + W+PT +
Sbjct: 807 VCHNGMNWMPTHL 819


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 218 VFGLCPALWAWERGAYESTD 159
           +  +C  LW W R  Y  T+
Sbjct: 51  ILPVCNGLWRWIRLTYGQTN 70


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 218 VFGLCPALWAWERGAYESTD 159
           +  +C  LW W R  Y  T+
Sbjct: 89  ILPVCNGLWRWIRLTYGQTN 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,763
Number of Sequences: 438
Number of extensions: 3795
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)