Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_C24
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   1.4  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    25   1.9  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    25   1.9  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.5  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.5  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   5.8  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.8  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 210 HGPPDGVWLPSSMDYSNARG 151
           H P + +WLP  + Y+NA G
Sbjct: 99  HVPSEHIWLPDIVLYNNADG 118


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 513 DRFGEDGDRXAPLRSVXILEFVRPMVANR 599
           +RFGE+ +   P+RS+ + +   PM   R
Sbjct: 48  NRFGENAEERIPVRSIALPDLRIPMSLGR 76


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 513 DRFGEDGDRXAPLRSVXILEFVRPMVANR 599
           +RFGE+ +   P+RS+ + +   PM   R
Sbjct: 48  NRFGENAEERIPVRSIALPDLRIPMSLGR 76


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 204 PPDGVWLPSSMDYSNARG 151
           PPD VW P  + ++NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 210 HGPPDGVWLPSSMDYSNARG 151
           H P D +W P  + Y+NA G
Sbjct: 103 HVPSDHIWRPDIVLYNNADG 122


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 210 HGPPDGVWLPSSMDYSNARG 151
           H P D +W P  + Y+NA G
Sbjct: 103 HVPSDHIWRPDIVLYNNADG 122


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 210 HGPPDGVWLPSSMDYSNARG 151
           H P D +W P  + Y+NA G
Sbjct: 99  HVPSDHIWRPDIVLYNNADG 118


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 204 PPDGVWLPSSMDYSNARG 151
           P + +WLP  + Y+NA G
Sbjct: 113 PSEHIWLPDIVLYNNADG 130


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 360 CPLLTNR*RLKSPLILVFVERFIC 431
           C LL NR R   PL+     +F+C
Sbjct: 711 CKLLYNRGRTYVPLVEALPNQFLC 734


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,877
Number of Sequences: 2352
Number of extensions: 10860
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)