BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_C18
(441 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113512-1|AAM29517.1| 131|Drosophila melanogaster RE59324p pro... 192 1e-49
AE013599-3424|AAF46871.1| 131|Drosophila melanogaster CG3751-PA... 192 1e-49
AE013599-708|AAM68835.1| 149|Drosophila melanogaster CG30356-PA... 30 1.6
BT029293-1|ABK30930.1| 681|Drosophila melanogaster RT01152p pro... 29 2.8
BT029292-1|ABK30929.1| 681|Drosophila melanogaster RT01151p pro... 29 2.8
BT029291-1|ABK30928.1| 681|Drosophila melanogaster RT01150p pro... 29 2.8
BT010123-1|AAQ22592.1| 489|Drosophila melanogaster AT19280p pro... 29 2.8
AE014297-3156|AAF55998.2| 681|Drosophila melanogaster CG31160-P... 29 2.8
AF027123-1|AAB82746.1| 490|Drosophila melanogaster apontic prot... 29 3.7
BT025834-1|ABF85734.1| 503|Drosophila melanogaster IP09280p pro... 28 6.5
AY060385-1|AAL25424.1| 194|Drosophila melanogaster LD28933p pro... 28 6.5
AE014296-2575|AAF49581.1| 192|Drosophila melanogaster CG6151-PB... 28 6.5
AE014296-2573|AAN11767.1| 194|Drosophila melanogaster CG6151-PA... 28 6.5
AE013599-2607|AAF57757.1| 260|Drosophila melanogaster CG14497-P... 28 6.5
BT001831-1|AAN71586.1| 332|Drosophila melanogaster RH47694p pro... 27 8.6
AY075538-1|AAL68345.1| 332|Drosophila melanogaster RH09039p pro... 27 8.6
AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown prot... 27 8.6
AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA... 27 8.6
AE013599-136|AAM68341.1| 332|Drosophila melanogaster CG14591-PB... 27 8.6
AE013599-135|AAF57289.1| 332|Drosophila melanogaster CG14591-PA... 27 8.6
>AY113512-1|AAM29517.1| 131|Drosophila melanogaster RE59324p
protein.
Length = 131
Score = 192 bits (469), Expect = 1e-49
Identities = 91/112 (81%), Positives = 99/112 (88%)
Frame = +2
Query: 53 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 232
MS TATIRTRKFMTNRLLARKQMVCDVLHPG +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1 MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60
Query: 233 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRNSVKNVR 388
F+TNFGGG+STGFALIYDTLD AKKFEPK+RLARHGL+E+K+ TR K R
Sbjct: 61 FRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQTRKQRKERR 112
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 367 QQRKERKNRMKKVRGTRNLK 426
+QRKER+NRMKKVRGT K
Sbjct: 106 KQRKERRNRMKKVRGTAKAK 125
>AE013599-3424|AAF46871.1| 131|Drosophila melanogaster CG3751-PA
protein.
Length = 131
Score = 192 bits (469), Expect = 1e-49
Identities = 91/112 (81%), Positives = 99/112 (88%)
Frame = +2
Query: 53 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 232
MS TATIRTRKFMTNRLLARKQMVCDVLHPG +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1 MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60
Query: 233 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRNSVKNVR 388
F+TNFGGG+STGFALIYDTLD AKKFEPK+RLARHGL+E+K+ TR K R
Sbjct: 61 FRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQTRKQRKERR 112
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 367 QQRKERKNRMKKVRGTRNLK 426
+QRKER+NRMKKVRGT K
Sbjct: 106 KQRKERRNRMKKVRGTAKAK 125
>AE013599-708|AAM68835.1| 149|Drosophila melanogaster CG30356-PA
protein.
Length = 149
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 223 RIRFQDKLRRWQINWIRFDLRHTRSGQEVRAQAQ 324
R + + R ++NW+ LR + +G+E R QAQ
Sbjct: 90 RFNYTYRSRSRKVNWVLAQLRKSAAGEECRPQAQ 123
>BT029293-1|ABK30930.1| 681|Drosophila melanogaster RT01152p
protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 316 QAQVSPPRPVREEEAHAQQRKERKNRMKKV 405
QAQ PP+ V E++ H QQ+++++ +V
Sbjct: 624 QAQSPPPQSVEEQQPHQQQQQQQEGATTEV 653
>BT029292-1|ABK30929.1| 681|Drosophila melanogaster RT01151p
protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 316 QAQVSPPRPVREEEAHAQQRKERKNRMKKV 405
QAQ PP+ V E++ H QQ+++++ +V
Sbjct: 624 QAQSPPPQSVEEQQPHQQQQQQQEGATTEV 653
>BT029291-1|ABK30928.1| 681|Drosophila melanogaster RT01150p
protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 316 QAQVSPPRPVREEEAHAQQRKERKNRMKKV 405
QAQ PP+ V E++ H QQ+++++ +V
Sbjct: 624 QAQSPPPQSVEEQQPHQQQQQQQEGATTEV 653
>BT010123-1|AAQ22592.1| 489|Drosophila melanogaster AT19280p
protein.
Length = 489
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 316 QAQVSPPRPVREEEAHAQQRKERKNRMKKV 405
QAQ PP+ V E++ H QQ+++++ +V
Sbjct: 427 QAQSPPPQSVEEQQPHQQQQQQQEGATTEV 456
>AE014297-3156|AAF55998.2| 681|Drosophila melanogaster CG31160-PA
protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 316 QAQVSPPRPVREEEAHAQQRKERKNRMKKV 405
QAQ PP+ V E++ H QQ+++++ +V
Sbjct: 624 QAQSPPPQSVEEQQPHQQQQQQQEGATTEV 653
>AF027123-1|AAB82746.1| 490|Drosophila melanogaster apontic
protein.
Length = 490
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 314 PKHRLARHGLYEKKRPTRNSVKNV 385
P H ++RHG++E + P S NV
Sbjct: 259 PNHSISRHGIHEAESPATISTSNV 282
>BT025834-1|ABF85734.1| 503|Drosophila melanogaster IP09280p
protein.
Length = 503
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 407 RTFFILFLRSLRCCAWASSSRTGRGGLTCAWARTSWPD 294
RT ++ L C W S +RT G C W + S+ D
Sbjct: 405 RTIHLIRLNDASGC-WESETRTVPSGCECMWPKHSYGD 441
>AY060385-1|AAL25424.1| 194|Drosophila melanogaster LD28933p
protein.
Length = 194
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 209 PDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKK 307
P ++ FG + FG G G ++Y + L KK
Sbjct: 115 PPIILCFGLASLFGSGLIFGTGVVYGMMALGKK 147
>AE014296-2575|AAF49581.1| 192|Drosophila melanogaster CG6151-PB,
isoform B protein.
Length = 192
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 209 PDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKK 307
P ++ FG + FG G G ++Y + L KK
Sbjct: 115 PPIILCFGLASLFGSGLIFGTGVVYGMMALGKK 147
>AE014296-2573|AAN11767.1| 194|Drosophila melanogaster CG6151-PA,
isoform A protein.
Length = 194
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 209 PDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKK 307
P ++ FG + FG G G ++Y + L KK
Sbjct: 115 PPIILCFGLASLFGSGLIFGTGVVYGMMALGKK 147
>AE013599-2607|AAF57757.1| 260|Drosophila melanogaster CG14497-PA
protein.
Length = 260
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 407 RTFFILFLRSLRCCAWASSSRTGRGGLTCAWARTSWPD 294
RT ++ L C W S +RT G C W + S+ D
Sbjct: 162 RTIHLIRLNDASGC-WESETRTVPSGCECMWPKHSYGD 198
>BT001831-1|AAN71586.1| 332|Drosophila melanogaster RH47694p
protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 342 RPWRANLCLGSNFLARSSVS*IKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRI 172
R W + L + F+ S + P+ LPPP + KP++ T L++L + S I
Sbjct: 30 RRWLETILLSALFIFIMHRSWQRLAPIKLPPPHEIQKPHSPT----RLFLLIALSMI 82
>AY075538-1|AAL68345.1| 332|Drosophila melanogaster RH09039p
protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 342 RPWRANLCLGSNFLARSSVS*IKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRI 172
R W + L + F+ S + P+ LPPP + KP++ T L++L + S I
Sbjct: 30 RRWLETILLSALFIFIMHRSWQRLAPIKLPPPHEIQKPHSPT----RLFLLIALSMI 82
>AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown
protein.
Length = 1231
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 289 TRSGQEVRAQAQVSPPRPVREEEAHAQQRKERK--NRMKKVRGTRNLK 426
T G+E +A++ +S R ++++ +RK+ K R KK +G R K
Sbjct: 801 TNVGKENKAKSPLSKDRKKKKKDKDKAERKKNKKDKRAKKEKGDRQKK 848
>AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA
protein.
Length = 1231
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 289 TRSGQEVRAQAQVSPPRPVREEEAHAQQRKERK--NRMKKVRGTRNLK 426
T G+E +A++ +S R ++++ +RK+ K R KK +G R K
Sbjct: 801 TNVGKENKAKSPLSKDRKKKKKDKDKAERKKNKKDKRAKKEKGDRQKK 848
>AE013599-136|AAM68341.1| 332|Drosophila melanogaster CG14591-PB,
isoform B protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 342 RPWRANLCLGSNFLARSSVS*IKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRI 172
R W + L + F+ S + P+ LPPP + KP++ T L++L + S I
Sbjct: 30 RRWLETILLSALFIFIMHRSWQRLAPIKLPPPHEIQKPHSPT----RLFLLIALSMI 82
>AE013599-135|AAF57289.1| 332|Drosophila melanogaster CG14591-PA,
isoform A protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 342 RPWRANLCLGSNFLARSSVS*IKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRI 172
R W + L + F+ S + P+ LPPP + KP++ T L++L + S I
Sbjct: 30 RRWLETILLSALFIFIMHRSWQRLAPIKLPPPHEIQKPHSPT----RLFLLIALSMI 82
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,355,741
Number of Sequences: 53049
Number of extensions: 425804
Number of successful extensions: 1610
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -