Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_C18
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 145 1e-35
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 37 0.007
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 30 0.65
Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical pr... 28 2.6
AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein sig... 28 2.6
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 28 3.5
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 28 3.5
U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine rece... 28 3.5
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 27 4.6
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 27 4.6
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 27 4.6
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 27 6.0
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 27 6.0
U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine rece... 27 6.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 27 8.0
U53333-3|AAA96156.1| 108|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 27 8.0
AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical... 27 8.0
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 145 bits (351), Expect = 1e-35
Identities = 67/104 (64%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
Frame = +2
Query: 71 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 250
TIRTRK +TN+LL RKQMV +V+HPG+PTV K +IREK+AK+YK TPD V FGF++ G
Sbjct: 6 TIRTRKVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGFESKIG 65
Query: 251 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEK-KRPTRNSVK 379
GGKS GFAL+YDT+D AKKFEPK+RL R GL K ++P R K
Sbjct: 66 GGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQRK 109
Score = 35.1 bits (77), Expect = 0.023
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 352 EEAHAQQRKERKNRMKKVRGTRNLK 426
E+ +QRKERKNR KKVRGT K
Sbjct: 101 EKPGRKQRKERKNRQKKVRGTAKAK 125
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 122 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 220
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 266 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRNSVKNVRTE*RRSAVPEI 421
GF L+YDT D A K++P+H G +R S+ + + RR P++
Sbjct: 54 GFTLVYDTFDFANKYQPEHSSNHDG----ASTSRTSISRRKEKRRREQAPKV 101
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 30.3 bits (65), Expect = 0.65
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 301 QEVRAQAQVSPPRPVREEEAHAQQRKERKNRMKKVRGTRNL 423
+EV Q Q+ P+P E AH ++E+K K+ + N+
Sbjct: 668 EEVDKQEQLPVPQPEEPEAAHEAPKEEKKKTRKRNKNKNNV 708
>Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical
protein T04D3.2 protein.
Length = 604
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 170 EIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYE 349
+IR+++ +MY V V F + +IYD + LAKK + +L + L E
Sbjct: 424 KIRKEIPEMYGFIQTPVTVKTFIVQMEEERRKKTKIIYDKVQLAKKKNKEIKLKKKVLEE 483
Query: 350 KKRPTRNSVKNVRTE 394
+++ T ++N+ E
Sbjct: 484 EEK-TEKMMENMTLE 497
>Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical
protein C16C2.2b protein.
Length = 431
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 187 RQNVQGYSRCSVRIRFQDKLRRWQINWIRFDLRHTRSGQEVRAQAQVSPPRP 342
RQN QGY R+RF K + W D T Q + PP+P
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 252
>Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical
protein C16C2.2a protein.
Length = 473
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 187 RQNVQGYSRCSVRIRFQDKLRRWQINWIRFDLRHTRSGQEVRAQAQVSPPRP 342
RQN QGY R+RF K + W D T Q + PP+P
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 252
>AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein
signaling regulator EAT-16 protein.
Length = 103
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 187 RQNVQGYSRCSVRIRFQDKLRRWQINWIRFDLRHTRSGQEVRAQAQVSPPRP 342
RQN QGY R+RF K + W D T Q + PP+P
Sbjct: 1 RQNAQGYRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 52
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 283 RHTRSGQEVRAQAQVSPPRPVREEEAHAQQRKERKNR 393
RH R +E+R Q Q R ++EE Q+ + K +
Sbjct: 544 RHDREREEMRLQKQKDEERRKKDEEERIQKENDEKKQ 580
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 283 RHTRSGQEVRAQAQVSPPRPVREEEAHAQQRKERKNR 393
RH R +E+R Q Q R ++EE Q+ + K +
Sbjct: 558 RHDREREEMRLQKQKDEERRKKDEEERIQKENDEKKQ 594
>U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine
receptor, class x protein74 protein.
Length = 323
Score = 27.9 bits (59), Expect = 3.5
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 183 FSRISVLLTV-GFPGCKTSQTICL-RA-NNLLVMNLRVRIVAVPSLILNY 43
FS + V L V GF + ICL RA NN++V+ + I P+L+L+Y
Sbjct: 22 FSSLIVYLYVSGFAEKTSFNVICLVRAVNNIIVLVVNFLIFLFPTLLLSY 71
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 5 SRDTCVXTPNY*K*FKMSEGTATIRTRKFMTNRLLARKQMVCDV-LHPGK 151
S D C+ +P + K S +A +RT F + + K+M+ D+ PGK
Sbjct: 37 SDDNCIVSPRF---RKSSSRSALVRTTSFNHKQYRSIKEMIIDLKQEPGK 83
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 5 SRDTCVXTPNY*K*FKMSEGTATIRTRKFMTNRLLARKQMVCDV-LHPGK 151
S D C+ +P + K S +A +RT F + + K+M+ D+ PGK
Sbjct: 37 SDDNCIVSPRF---RKSSSRSALVRTTSFNHKQYRSIKEMIIDLKQEPGK 83
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 5 SRDTCVXTPNY*K*FKMSEGTATIRTRKFMTNRLLARKQMVCDV-LHPGK 151
S D C+ +P + K S +A +RT F + + K+M+ D+ PGK
Sbjct: 37 SDDNCIVSPRF---RKSSSRSALVRTTSFNHKQYRSIKEMIIDLKQEPGK 83
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 27.1 bits (57), Expect = 6.0
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 259 INWIRFDLRHTRSGQEVRAQAQVSP-PRPVREEEAHAQQRKERKNRMKKV 405
+ W +D+ + A+V+ P+ + E + ++RKERKNR + +
Sbjct: 551 LEWAPYDVMGATAPPAEDKTAEVADKPKLSKREMTYEEKRKERKNRQQGI 600
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 310 ELLGQIECVVDQSESS*FATSEVCLETEYEHYIGSNLVHFGELLTD 173
+LL IE VVD+ + + S+ C +E + ++G N+VH L+D
Sbjct: 1077 DLLSGIERVVDEWKVAECGISDQCNASENQVFVG-NVVHVVSQLSD 1121
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 310 ELLGQIECVVDQSESS*FATSEVCLETEYEHYIGSNLVHFGELLTD 173
+LL IE VVD+ + + S+ C +E + ++G N+VH L+D
Sbjct: 1077 DLLSGIERVVDEWKVAECGISDQCNASENQVFVG-NVVHVVSQLSD 1121
>U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine
receptor, class x protein73 protein.
Length = 287
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = -1
Query: 138 KTS-QTICL-RA-NNLLVMNLRVRIVAVPSLILNY 43
KTS ICL RA NN++V+ ++ PSL+L+Y
Sbjct: 4 KTSFNVICLTRAVNNIIVLVFNFLVITFPSLLLSY 38
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 334 PRPVREEEAHAQQRKERKNR 393
P+P+ EE+A Q+ E+KNR
Sbjct: 145 PKPLIEEKAKKQENDEKKNR 164
>U53333-3|AAA96156.1| 108|Caenorhabditis elegans Hypothetical
protein F36A4.11 protein.
Length = 108
Score = 26.6 bits (56), Expect = 8.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -2
Query: 440 GXRTYFRFLVPRTFFILFLRSLRCCAWASSSRTGRGGLTCAWARTSWPDRV 288
G T F ++ FF FL++ W S TG G A TSW + V
Sbjct: 21 GRSTGFGYVRGSWFFFYFLKNFTNSVWKLGSPTGPAGTPGA---TSWQNLV 68
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 133 IANHLLARQQSVGHEFASANSRCSFTHFEL 44
+A H+ A + S+G+ + +C+ HF L
Sbjct: 991 VAMHISAEEGSIGNTYPLPQMKCTIDHFTL 1020
>AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical
protein R07C3.3 protein.
Length = 470
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +1
Query: 7 QRHVRVDAELLKIIQNE*RNSDY 75
++H++ D + LK+ +N+ +NSDY
Sbjct: 260 KKHLKWDLKSLKLFRNDSKNSDY 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,370,019
Number of Sequences: 27780
Number of extensions: 214730
Number of successful extensions: 816
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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