Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_C06
         (630 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p pro...   138   4e-33
AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA...   138   4e-33
AE014297-4122|AAF56703.2| 1183|Drosophila melanogaster CG6599-PA...    30   2.2  

>AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p
           protein.
          Length = 396

 Score =  138 bits (335), Expect = 4e-33
 Identities = 68/107 (63%), Positives = 84/107 (78%), Gaps = 2/107 (1%)
 Frame = +2

Query: 314 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 487
           R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 488 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLXTK 628
           N+VVAPG+   CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTL TK
Sbjct: 87  NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTK 133


>AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA
           protein.
          Length = 396

 Score =  138 bits (335), Expect = 4e-33
 Identities = 68/107 (63%), Positives = 84/107 (78%), Gaps = 2/107 (1%)
 Frame = +2

Query: 314 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 487
           R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 488 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLXTK 628
           N+VVAPG+   CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTL TK
Sbjct: 87  NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTK 133


>AE014297-4122|AAF56703.2| 1183|Drosophila melanogaster CG6599-PA
           protein.
          Length = 1183

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +1

Query: 412 HGAMSVTYRSSSCFEPRHETADSI--GQYCCGSRRICSLPTRRSAASWVLQEGDNDGREE 585
           H    +  R+SSC E +HE    I   +     RR  S     S++ W  +E   D  E 
Sbjct: 509 HKRRQLRRRTSSCGESKHERCSEICRSKSNIEIRRRKSRERYASSSEWE-EESAEDSCEN 567

Query: 586 CC*YRGHHENLXNER 630
           CC ++   + + N +
Sbjct: 568 CCYHKRQKDRVVNRK 582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,800,457
Number of Sequences: 53049
Number of extensions: 540591
Number of successful extensions: 1656
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)