Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_C05
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.8  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 527 ENLEFPSTSKIKLVQNKRTKLW 592
           E L+FPS  KI   +  R +LW
Sbjct: 354 ETLQFPSGMKIISSKKDRQELW 375


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 519 FLVKFKSHRLNNMYLDILLS*NI*NPVK 436
           FL+K + +RLN+   +  ++ N   P+K
Sbjct: 486 FLIKIRQYRLNHKPFNFHITINADKPMK 513


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 519 FLVKFKSHRLNNMYLDILLS*NI*NPVK 436
           FL+K + +RLN+   +  ++ N   P+K
Sbjct: 486 FLIKIRQYRLNHKPFNFHITINADKPMK 513


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 96  PVSYKHRVTILTGVLTSF 149
           PVSY   + I TGV  +F
Sbjct: 297 PVSYTKAIDIWTGVCLTF 314


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 96  PVSYKHRVTILTGVLTSF 149
           PVSY   + I TGV  +F
Sbjct: 297 PVSYTKAIDIWTGVCLTF 314


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 540 FHQRQKLNWFKINVLSYGEIS 602
           +HQR   +WF+I+      IS
Sbjct: 17  YHQRCSRDWFRISAGCVSRIS 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,955
Number of Sequences: 438
Number of extensions: 2885
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)