Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_C01
(401 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 155 2e-37
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 152 2e-36
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 150 9e-36
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 144 8e-34
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 125 3e-28
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 123 1e-27
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 123 1e-27
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 122 2e-27
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 121 5e-27
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 118 6e-26
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 110 9e-24
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 110 1e-23
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 106 2e-22
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 105 3e-22
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 103 1e-21
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 96 2e-19
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 84 1e-15
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 7e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 75 7e-13
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 65 6e-10
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 55 5e-07
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 55 6e-07
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 53 2e-06
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 52 6e-06
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 48 5e-05
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 45 5e-04
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 44 9e-04
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 38 0.056
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.074
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 36 0.30
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 0.40
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.40
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 35 0.52
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 0.69
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 0.91
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 1.2
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 1.2
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 1.6
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 2.1
UniRef50_A7DID4 Cluster: Putative uncharacterized protein precur... 33 2.1
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 2.1
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 2.1
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 33 2.8
UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_UPI000023E72B Cluster: hypothetical protein FG04675.1; ... 32 3.7
UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory c... 32 3.7
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 32 3.7
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 32 3.7
UniRef50_Q75LF8 Cluster: Putative uncharacterized protein OSJNBb... 32 3.7
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 32 3.7
UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1; ... 32 4.9
UniRef50_Q1J406 Cluster: Hydrogenase accessory protein HypB; n=4... 32 4.9
UniRef50_A4CKW9 Cluster: Putative uncharacterized protein; n=1; ... 32 4.9
UniRef50_A4HF24 Cluster: Putative uncharacterized protein; n=1; ... 32 4.9
UniRef50_Q44233 Cluster: Beta-galactosidase; n=1; Arthrobacter s... 31 6.4
UniRef50_A5BCB0 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_Q6T4R4 Cluster: Transcription factor Hox1; n=3; Enterop... 31 6.4
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 31 6.4
UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya C... 31 8.5
UniRef50_Q9ABC7 Cluster: Cation efflux family protein; n=35; Bac... 31 8.5
UniRef50_Q62HD7 Cluster: Chorismate binding enzyme; n=16; Burkho... 31 8.5
UniRef50_Q4ANU4 Cluster: Sensor protein; n=1; Chlorobium phaeoba... 31 8.5
UniRef50_Q1IV98 Cluster: Putative uncharacterized protein precur... 31 8.5
UniRef50_A6E2M8 Cluster: Putative uncharacterized protein; n=2; ... 31 8.5
UniRef50_A5P3R6 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 31 8.5
UniRef50_Q9XIL4 Cluster: Mutator-like transposase; n=1; Arabidop... 31 8.5
UniRef50_Q9LF59 Cluster: Glycine/proline-rich protein; n=12; Euk... 31 8.5
UniRef50_Q5Z8U3 Cluster: Putative uncharacterized protein P0018H... 31 8.5
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 31 8.5
UniRef50_Q3LS90 Cluster: 185/333; n=264; Strongylocentrotus purp... 31 8.5
UniRef50_A4VEK6 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 155 bits (377), Expect = 2e-37
Identities = 72/99 (72%), Positives = 83/99 (83%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 399
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 152 bits (369), Expect = 2e-36
Identities = 73/107 (68%), Positives = 85/107 (79%)
Frame = +1
Query: 79 SIGSPTFSVGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 258
S+G+ V V+ E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+ A
Sbjct: 2 SLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
Query: 259 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 399
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 108
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 150 bits (364), Expect = 9e-36
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 144 VFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGGTHR 203
Query: 343 SGQGAFGNMCRGGRMFAPT 399
SGQGAFGNMCRGGRMFAPT
Sbjct: 204 SGQGAFGNMCRGGRMFAPT 222
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 144 bits (348), Expect = 8e-34
Identities = 63/79 (79%), Positives = 69/79 (87%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GGGTHR
Sbjct: 26 VFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHR 85
Query: 343 SGQGAFGNMCRGGRMFAPT 399
+GQ AFGNMCR GRMFAPT
Sbjct: 86 AGQAAFGNMCRSGRMFAPT 104
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 125 bits (302), Expect = 3e-28
Identities = 63/101 (62%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Frame = +1
Query: 100 SVGVFREE*DGA-GXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 276
SV V+ D G P P+ VF APIR D+V VH +M+KNSRQ Y V++ +G SA
Sbjct: 6 SVSVYSASSDSVVGTCPLPA--VFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSA 63
Query: 277 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 399
SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPT
Sbjct: 64 HSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPT 104
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 123 bits (297), Expect = 1e-27
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGGTHR
Sbjct: 27 VFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHR 86
Query: 343 SGQGAFGNMCRGGRMFAPT 399
+GQ AFGNMCRGG MF PT
Sbjct: 87 AGQAAFGNMCRGGGMFNPT 105
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 123 bits (297), Expect = 1e-27
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGGTHR
Sbjct: 26 VFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGGTHR 85
Query: 343 SGQGAFGNMCRGGRMFAPT 399
+GQ A+ N CR G M+APT
Sbjct: 86 AGQAAYANFCRAGGMYAPT 104
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 122 bits (295), Expect = 2e-27
Identities = 61/98 (62%), Positives = 66/98 (67%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
V VF P VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAES
Sbjct: 8 VSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAES 67
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 396
WGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P
Sbjct: 68 WGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSP 105
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 121 bits (292), Expect = 5e-27
Identities = 52/79 (65%), Positives = 63/79 (79%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGGTHR
Sbjct: 26 VFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGGTHR 85
Query: 343 SGQGAFGNMCRGGRMFAPT 399
SGQ A+ N CR G MFAPT
Sbjct: 86 SGQAAYANFCRAGGMFAPT 104
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 118 bits (283), Expect = 6e-26
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = +1
Query: 151 PSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 330
P VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G
Sbjct: 24 PLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGS 83
Query: 331 GTHRSGQGAFGNMCRGGRMFAP 396
GTHRSGQ AFGN CR GRM P
Sbjct: 84 GTHRSGQAAFGNQCRKGRMSLP 105
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 110 bits (265), Expect = 9e-24
Identities = 52/79 (65%), Positives = 58/79 (73%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHR
Sbjct: 22 VFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHR 81
Query: 343 SGQGAFGNMCRGGRMFAPT 399
SGQGA N CRGGR+F PT
Sbjct: 82 SGQGAIANFCRGGRIFNPT 100
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 110 bits (264), Expect = 1e-23
Identities = 51/79 (64%), Positives = 57/79 (72%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R
Sbjct: 24 VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRR 83
Query: 343 SGQGAFGNMCRGGRMFAPT 399
+GQGAF N CR GRM PT
Sbjct: 84 AGQGAFANFCRKGRMAHPT 102
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 106 bits (254), Expect = 2e-22
Identities = 46/75 (61%), Positives = 59/75 (78%)
Frame = +1
Query: 172 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 351
+PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ
Sbjct: 30 SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQ 89
Query: 352 GAFGNMCRGGRMFAP 396
AF N RGG M++P
Sbjct: 90 AAFANSARGGHMYSP 104
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 105 bits (252), Expect = 3e-22
Identities = 51/78 (65%), Positives = 61/78 (78%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R
Sbjct: 27 VFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGR 86
Query: 343 SGQGAFGNMCRGGRMFAP 396
+GQGAFGNM R G MF+P
Sbjct: 87 NGQGAFGNMTRKGHMFSP 104
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 103 bits (247), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +1
Query: 220 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 399
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 96.3 bits (229), Expect = 2e-19
Identities = 46/99 (46%), Positives = 64/99 (64%)
Frame = +1
Query: 100 SVGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 279
+V V +E A P VF PIR ++V +V+V+++KN++QP+ AG + SA
Sbjct: 5 TVNVLTQEGQKASTIELPK--VFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAI 62
Query: 280 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 396
SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P
Sbjct: 63 SWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNP 101
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 83.8 bits (198), Expect = 1e-15
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +1
Query: 151 PSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 330
P VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR G
Sbjct: 19 PRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRKHG- 77
Query: 331 GTHRSGQGAFGNMCRGGRMFAPT 399
G GA+ N RGG M PT
Sbjct: 78 -----GIGAYANFARGGHMAHPT 95
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 187 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 333
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 74.5 bits (175), Expect = 7e-13
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +1
Query: 256 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF 390
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLF 103
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 64.9 bits (151), Expect = 6e-10
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 166 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRS 345
F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G +
Sbjct: 22 FEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRRHPAA 81
Query: 346 GQGAFGNMCRGG-RMFAPT 399
G+ A GG + APT
Sbjct: 82 GRAARVAQAVGGQKAHAPT 100
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 55.2 bits (127), Expect = 5e-07
Identities = 35/90 (38%), Positives = 44/90 (48%)
Frame = +1
Query: 127 DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 306
DGA + F PIRPDL+ ++S QP V + AG + S ES+G G +A
Sbjct: 35 DGAYVADIEAPLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIA 94
Query: 307 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 396
RIPR +G R G F RGGR P
Sbjct: 95 RIPRYKGSLWPR---GCFAPNTRGGRRAHP 121
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 54.8 bits (126), Expect = 6e-07
Identities = 32/78 (41%), Positives = 42/78 (53%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
+F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 34 IFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG----- 88
Query: 343 SGQGAFGNMCRGGRMFAP 396
S + A NM RGGR P
Sbjct: 89 SLRAALVNMARGGRAAHP 106
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 53.2 bits (122), Expect = 2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
+F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 22 IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG----- 76
Query: 343 SGQGAFGNMCRGGRMFAP 396
S + AF GGR P
Sbjct: 77 SSKAAFVPQAIGGRKAHP 94
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 51.6 bits (118), Expect = 6e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 342
+F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 28 IFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK-----N 82
Query: 343 SGQGAFGNMCRGGRMFAP 396
SG+ A GGR+ P
Sbjct: 83 SGEAALAPNTVGGRLAFP 100
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 48.4 bits (110), Expect = 5e-05
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGT 336
VF P R DL+ + + + QP AG SA+S TG ARI R++GGG
Sbjct: 21 VFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGG 80
Query: 337 HRSGQGAFGNMCRGGRMFAP 396
R G+ RGGR P
Sbjct: 81 RRRGEAGEVASIRGGRQAHP 100
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 45.2 bits (102), Expect = 5e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 327
VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 21 VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 44.4 bits (100), Expect = 9e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 330
VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 21 VFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG 76
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 38.3 bits (85), Expect = 0.056
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 330
VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 23 VFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGG 78
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.074
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 398 VGANIRPPRHMLPKAP*P 345
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 35.9 bits (79), Expect = 0.30
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +1
Query: 163 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAVARIPRV 321
VF IR DL+ ++ N RQ Y + +AG + S E WG GR V+RI R
Sbjct: 53 VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGVSRIMRK 112
Query: 322 RGGGT 336
G T
Sbjct: 113 AGQRT 117
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 0.40
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 361 RRHPDRTYGYHHHGHAEFGQQHVR-YP 284
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.40
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 304 ARIPRVRGGGTHRSGQGAFGNMCRGG 381
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 35.1 bits (77), Expect = 0.52
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 279 IMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVR 392
++G+R C SA W VR C+R HV WW +VR
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVR 154
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 0.69
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 376 HDTCYRRHPDRTYGYHHHGHAEFG 305
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 0.91
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 388 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 275
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 1.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 376 HDTCYRRHPDRTYGYHHHGHAEFGQQH 296
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 1.2
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 274 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 384
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 1.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 377 PRHMLPKAP*PDLWVPPPR 321
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 2.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 299
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_A7DID4 Cluster: Putative uncharacterized protein
precursor; n=2; Methylobacterium extorquens PA1|Rep:
Putative uncharacterized protein precursor -
Methylobacterium extorquens PA1
Length = 114
Score = 33.1 bits (72), Expect = 2.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 397 WGRTYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHW 269
WG + HH + H R +G+ HH H +G + HW
Sbjct: 74 WGHRHHHHG--HWGHDRRHWGHRHHHHGHWGHHRRHWGHRHHW 114
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHW 269
HH +R HP R +G+ HH H +G H R RHW
Sbjct: 62 HHHFGHRHHP-RHWGHRHHHHGHWG--HDR----RHW 91
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.1 bits (72), Expect = 2.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 388 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQP 254
TY+ H Y +HP T+ YHH H + ++ ++P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 2.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -2
Query: 376 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
Score = 32.3 bits (70), Expect = 3.7
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 32.7 bits (71), Expect = 2.8
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 385 YVHHD-TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 272
Y H+D Y +H D + HHHG +G H + H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. RS9916|Rep: Putative uncharacterized
protein - Synechococcus sp. RS9916
Length = 143
Score = 32.7 bits (71), Expect = 2.8
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +3
Query: 252 GGWSPNQCRIMG--YRTCCCPNSACPWWWY 335
GGW P CR Y + C PWWW+
Sbjct: 54 GGWVPAYCRDQPDQYSSGSCYGGGVPWWWW 83
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 2.8
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 220 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 387
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_UPI000023E72B Cluster: hypothetical protein FG04675.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04675.1 - Gibberella zeae PH-1
Length = 285
Score = 32.3 bits (70), Expect = 3.7
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1
Query: 398 VGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALV 267
V A IRP H L K P PD+W+ P T+ + + A H S +
Sbjct: 163 VQAQIRPD-HTLFKPPVPDMWLDPEHTKAVLSGAGLDVHTSTAI 205
>UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory
cofactor NHE-RF2 (NHERF-2) (Tyrosine kinase activator
protein 1) (TKA-1) (SRY-interacting protein 1) (SIP- 1)
(Solute carrier family 9 isoform A3 regulatory factor 2)
(NHE3 kinase A regulatory protein E3KARP)
(Sodium-hydroge; n=2; Danio rerio|Rep: Na(+)/H(+)
exchange regulatory cofactor NHE-RF2 (NHERF-2) (Tyrosine
kinase activator protein 1) (TKA-1) (SRY-interacting
protein 1) (SIP- 1) (Solute carrier family 9 isoform A3
regulatory factor 2) (NHE3 kinase A regulatory protein
E3KARP) (Sodium-hydroge - Danio rerio
Length = 385
Score = 32.3 bits (70), Expect = 3.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 367 CYRRHPDRTYGYHHHGHAEFGQQHVR 290
CY DR YG+H HG G Q++R
Sbjct: 10 CYLTKGDRGYGFHLHGERNRGAQYIR 35
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 32.3 bits (70), Expect = 3.7
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 380 PPRHMLPKAP*PDLWV--PPPRTRGIRATARPVP 285
PP LP P PD +V PPP+ G A PVP
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVP 385
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.3 bits (70), Expect = 3.7
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 160 FVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 327
F++K P +PD + HV+ +N+ +P+ + E H +A G A + + G
Sbjct: 434 FLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAAFMAQHNG 493
Query: 328 GGTHRSGQG 354
G S G
Sbjct: 494 GANMESHAG 502
>UniRef50_Q75LF8 Cluster: Putative uncharacterized protein
OSJNBb0079B16.11; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0079B16.11 - Oryza sativa subsp. japonica (Rice)
Length = 228
Score = 32.3 bits (70), Expect = 3.7
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +1
Query: 115 REE*DGAGXQPSP---SRFVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAES 282
R+ G+G + P ++ AP D +V S + R P C S E + +AES
Sbjct: 90 RQRQGGSGWERHPWPHDSWIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAES 149
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGA 357
TG A R R+ G T+ + + A
Sbjct: 150 GATGLAHTRAGRIHAGPTNDNDEEA 174
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 32.3 bits (70), Expect = 3.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 392 ANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSA 273
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
>UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to ZP1 -
Monodelphis domestica
Length = 649
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 380 PPRHMLPKAP*PDLWVPPPR-TRGIRATARPVPHDSA 273
PPR LP P P L PPR TR R+T RP P SA
Sbjct: 148 PPRPSLPARPRPPLSAQPPRSTRPPRST-RPPPPPSA 183
>UniRef50_Q1J406 Cluster: Hydrogenase accessory protein HypB; n=4;
Bacteria|Rep: Hydrogenase accessory protein HypB -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 303
Score = 31.9 bits (69), Expect = 4.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 376 HDTCYRRHPDRTYGYHHHGHAEFGQQH 296
HD + D ++G+HHH H + G H
Sbjct: 47 HDHTHSHDHDHSHGHHHHHHHDHGHDH 73
>UniRef50_A4CKW9 Cluster: Putative uncharacterized protein; n=1;
Robiginitalea biformata HTCC2501|Rep: Putative
uncharacterized protein - Robiginitalea biformata
HTCC2501
Length = 481
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 326 PRTRGIRATARPVPHDSALVW*PASLLT-Q*GCLEFLDIET 207
P + +RATAR A VW P LL Q GC+E +DIET
Sbjct: 21 PLPKLLRATARVPKLLRAAVWLPVLLLLPQLGCVEEVDIET 61
>UniRef50_A4HF24 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 327
Score = 31.9 bits (69), Expect = 4.9
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +1
Query: 16 SLSPLLVYISGGIASLK*RNESIGSPTFSVGVFREE*DGAGXQPSPSRFVFKAPIRPDLV 195
S +P L S SLK S+ PT S VF+ G+ R F +P + V
Sbjct: 159 SAAPDLAVTSHSPTSLK-TLASVAPPTASAAVFQIGSKGSSAPAFHYRIHFFSP--SERV 215
Query: 196 NDVHVSMSKNSRQPYCVSKEAGHQ-TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 372
S+ SR S AG + S +W T A R RGGG + +G +
Sbjct: 216 FSA-CSVGALSRVEIAKSTLAGSRGVSTSTWSTTVAAER----RGGGLGKCDRGGSADRL 270
Query: 373 RGGR 384
RGGR
Sbjct: 271 RGGR 274
>UniRef50_Q44233 Cluster: Beta-galactosidase; n=1; Arthrobacter
sp.|Rep: Beta-galactosidase - Arthrobacter sp
Length = 637
Score = 31.5 bits (68), Expect = 6.4
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 220 KNSRQPYCVSKEAGHQTSAE--SWGTGRAVARIPRVRGGGTHRS 345
+NS +P+C + E + + SW +++ R R RGG THR+
Sbjct: 388 RNSTRPWCRTPEPTREYGVKLLSWAQAQSLVRGSRRRGGITHRN 431
>UniRef50_A5BCB0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 139
Score = 31.5 bits (68), Expect = 6.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 286 GTGRAVARIPRVRGGGTHRSGQGAFGN 366
GTG A+A+ PRV GGG ++G G GN
Sbjct: 112 GTGGALAQNPRVEGGGA-KTGYGTGGN 137
>UniRef50_Q6T4R4 Cluster: Transcription factor Hox1; n=3;
Enteropneusta|Rep: Transcription factor Hox1 -
Ptychodera flava
Length = 334
Score = 31.5 bits (68), Expect = 6.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 251
HHD + HP + H H H + QQH + I H D P
Sbjct: 158 HHDQHHHHHPQQQQPPHSHHHPQQQQQH-QLDSINHNNADDSP 199
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 31.5 bits (68), Expect = 6.4
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 394 GRTYVH-HDTCYRRHPDRTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQ 257
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya
CG8819-PA, isoform A; n=2; Endopterygota|Rep: PREDICTED:
similar to achintya CG8819-PA, isoform A - Apis
mellifera
Length = 447
Score = 31.1 bits (67), Expect = 8.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 364 YRRHPDRTYGYHHHGHAEFGQQHVRY 287
YRRH + YHHH H + H RY
Sbjct: 53 YRRHYRNDHHYHHHHHHYHHRHHHRY 78
>UniRef50_Q9ABC7 Cluster: Cation efflux family protein; n=35;
Bacteria|Rep: Cation efflux family protein - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 361
Score = 31.1 bits (67), Expect = 8.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -2
Query: 394 GRTYVHHDTCYRRHPDRTYGYHHHGHAEFGQQH 296
G + HD + +G+HHHGH G H
Sbjct: 35 GHGHHGHDHAHGHGHGHGHGHHHHGHGHHGHHH 67
>UniRef50_Q62HD7 Cluster: Chorismate binding enzyme; n=16;
Burkholderia|Rep: Chorismate binding enzyme -
Burkholderia mallei (Pseudomonas mallei)
Length = 668
Score = 31.1 bits (67), Expect = 8.5
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = -3
Query: 243 AVGLPRVLGHRNVNIIDQVRTYGRLEYEXGGAWLXPCTVSLFSEYTDTKGRA 88
A G P L +R + VR YG L GGAW+ C+ LF E T RA
Sbjct: 157 AFGAPLAL-YRRLRARQPVR-YGALVALPGGAWIVSCSPELFVEKTGALLRA 206
>UniRef50_Q4ANU4 Cluster: Sensor protein; n=1; Chlorobium
phaeobacteroides BS1|Rep: Sensor protein - Chlorobium
phaeobacteroides BS1
Length = 993
Score = 31.1 bits (67), Expect = 8.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 383 RPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVW 264
RPPR+ + +A D++VP GIR + HD VW
Sbjct: 240 RPPRYAVRRAGNGDVYVPLNSREGIRPDSAVNEHDHKRVW 279
>UniRef50_Q1IV98 Cluster: Putative uncharacterized protein
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Putative uncharacterized protein precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 612
Score = 31.1 bits (67), Expect = 8.5
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Frame = +1
Query: 4 HGGWSLSPLLVYISGGIASLK*RNESIGSPTFSVGVFREE*DGA----GXQPSPSRFVFK 171
H G P++ +GG+ S+ + VGV+ + G P + V
Sbjct: 98 HKGSLTGPVVASSTGGVPQTG-EGVSLSPTSLGVGVYVVHVVASTTVPGDSPKGTAVVAT 156
Query: 172 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 303
API P N V +N + P + +G + ++W TGR +
Sbjct: 157 APITPPPPN-VTPPTYRNYQSPTGIGDNSGEPSIGDNWNTGRVM 199
>UniRef50_A6E2M8 Cluster: Putative uncharacterized protein; n=2;
Roseovarius|Rep: Putative uncharacterized protein -
Roseovarius sp. TM1035
Length = 422
Score = 31.1 bits (67), Expect = 8.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 376 HDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQ 257
HD + H D + + HH H + H YP RH G +
Sbjct: 377 HDHGHHHHHDHDHPHDHHDH-DHDHHHAPYPHARHPHGPE 415
>UniRef50_A5P3R6 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 975
Score = 31.1 bits (67), Expect = 8.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 218 PRTRGSPTA*ARRLVTKPVPNHGVPDVLLPE 310
PR G P ARR V +P HG D++LPE
Sbjct: 726 PRPLGQPLVPARRRVVEPDLAHGPGDLVLPE 756
>UniRef50_Q9XIL4 Cluster: Mutator-like transposase; n=1; Arabidopsis
thaliana|Rep: Mutator-like transposase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 545
Score = 31.1 bits (67), Expect = 8.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 268 TSAESWGTGRAVARIPRVRGGGTHRSGQG 354
T A GTGRA R PRV+ G SG+G
Sbjct: 486 TRANQTGTGRARGRPPRVKNGEGKNSGKG 514
>UniRef50_Q9LF59 Cluster: Glycine/proline-rich protein; n=12;
Eukaryota|Rep: Glycine/proline-rich protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 173
Score = 31.1 bits (67), Expect = 8.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEF 308
HH Y H YGY +HGH +F
Sbjct: 122 HHHGHYGHHHGHGYGYGYHGHGKF 145
>UniRef50_Q5Z8U3 Cluster: Putative uncharacterized protein
P0018H04.23; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0018H04.23 - Oryza sativa subsp. japonica (Rice)
Length = 98
Score = 31.1 bits (67), Expect = 8.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 377 PRHMLPKAP*PDLWVPPPRTRGIRATARPVPH 282
P P +P W PP RG+RA VPH
Sbjct: 22 PERFAPSSPSTSWWSWPPPGRGLRADVHNVPH 53
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 31.1 bits (67), Expect = 8.5
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 181 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 360
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 361 GNMCRGGRM 387
G GG M
Sbjct: 748 GG--AGGLM 754
>UniRef50_Q3LS90 Cluster: 185/333; n=264; Strongylocentrotus
purpuratus|Rep: 185/333 - Strongylocentrotus purpuratus
(Purple sea urchin)
Length = 494
Score = 31.1 bits (67), Expect = 8.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 373 DTCYRRHPDRTYGYH-HHGHAEFGQQH 296
D + RH DR + +H HHGH E QH
Sbjct: 228 DGRHHRHHDRHHAHHGHHGHHEHHHQH 254
>UniRef50_A4VEK6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 243
Score = 31.1 bits (67), Expect = 8.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 152 GLG-CXPAPSHSSLNTPTLKVGLPIDSFRYFSEAIP 48
GLG C PS + P VG+P+D YF ++ P
Sbjct: 208 GLGFCSQIPSQMNTQGPKSVVGIPVDFILYFKQSSP 243
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,443,918
Number of Sequences: 1657284
Number of extensions: 9126495
Number of successful extensions: 30790
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 28377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30421
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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