Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_B20
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription ... 93 1e-18
BC110830-1|AAI10831.1| 377|Homo sapiens RELA protein protein. 93 1e-18
BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein. 93 1e-18
BC014095-1|AAH14095.1| 246|Homo sapiens RELA protein protein. 93 1e-18
BC011603-1|AAH11603.1| 220|Homo sapiens RELA protein protein. 93 1e-18
Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcript... 92 1e-18
L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription ... 87 4e-17
X61499-1|CAA43716.1| 415|Homo sapiens NF-kB subunit protein. 84 4e-16
X61498-1|CAA43715.1| 933|Homo sapiens NF-kB subunit protein. 84 4e-16
U20816-1|AAA68171.1| 220|Homo sapiens nuclear factor kappa-B2 p... 84 4e-16
U09609-1|AAA21462.2| 669|Homo sapiens p80HT protein. 84 4e-16
S76638-1|AAB21124.1| 900|Homo sapiens p50-NF-kappa B homolog pr... 84 4e-16
BT009769-1|AAP88771.1| 899|Homo sapiens nuclear factor of kappa... 84 4e-16
BC002844-1|AAH02844.1| 899|Homo sapiens nuclear factor of kappa... 84 4e-16
AY865619-1|AAW56071.1| 900|Homo sapiens nuclear factor of kappa... 84 4e-16
AL121928-1|CAC08399.1| 900|Homo sapiens nuclear factor of kappa... 84 4e-16
AY455868-1|AAR13863.1| 534|Homo sapiens v-rel reticuloendotheli... 83 8e-16
X75042-1|CAA52954.1| 619|Homo sapiens c-rel protein. 80 6e-15
DQ314888-1|ABC40747.1| 619|Homo sapiens v-rel reticuloendotheli... 80 6e-15
BC117191-1|AAI17192.1| 587|Homo sapiens REL protein protein. 80 6e-15
Z47748-1|CAB94757.1| 969|Homo sapiens NFKB1 protein. 75 2e-13
M58603-1|AAA36360.1| 968|Homo sapiens nuclear factor kappa-B DN... 75 2e-13
AY223820-1|AAO30127.1| 968|Homo sapiens nuclear factor of kappa... 75 2e-13
AF213884-1|AAF35232.1| 968|Homo sapiens nuclear factor of kappa... 75 2e-13
M55643-1|AAA36361.1| 969|Homo sapiens factor KBF1 protein. 74 4e-13
BC051765-1|AAH51765.1| 969|Homo sapiens nuclear factor of kappa... 74 4e-13
DQ314887-1|ABC40746.1| 579|Homo sapiens v-rel reticuloendotheli... 62 1e-09
BC028013-1|AAH28013.1| 579|Homo sapiens v-rel reticuloendotheli... 62 1e-09
AF043463-1|AAC82346.1| 579|Homo sapiens I-REL protein. 62 1e-09
M83221-1|AAA36127.1| 579|Homo sapiens I-Rel protein. 60 9e-09
BC037281-1|AAH37281.1| 215|Homo sapiens LOC439951 protein protein. 31 4.6
BX538115-1|CAD98025.1| 525|Homo sapiens hypothetical protein pr... 30 6.1
BC121808-1|AAI21809.1| 530|Homo sapiens RIC8A protein protein. 30 6.1
BC121807-1|AAI21808.1| 530|Homo sapiens RIC8A protein protein. 30 6.1
BC111499-1|AAI11500.1| 530|Homo sapiens RIC8A protein protein. 30 6.1
BC011821-1|AAH11821.2| 467|Homo sapiens RIC8A protein protein. 30 6.1
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 30 6.1
AL390088-1|CAB98211.1| 531|Homo sapiens hypothetical protein, s... 30 6.1
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 30 6.1
AK027461-1|BAB55126.1| 421|Homo sapiens protein ( Homo sapiens ... 30 6.1
AK022870-1|BAB14282.1| 291|Homo sapiens protein ( Homo sapiens ... 30 6.1
AY950800-1|AAY25182.1| 112|Homo sapiens immunoglobulin lambda l... 30 8.1
>M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription
factor protein.
Length = 551
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3
Query: 429 SQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPA 608
++ A P V I+EQP + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP
Sbjct: 11 AEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPG 70
Query: 609 TIVVSCVNKDPP 644
T+ +S V KDPP
Sbjct: 71 TVRISLVTKDPP 82
>BC110830-1|AAI10831.1| 377|Homo sapiens RELA protein protein.
Length = 377
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3
Query: 429 SQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPA 608
++ A P V I+EQP + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP
Sbjct: 11 AEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPG 70
Query: 609 TIVVSCVNKDPP 644
T+ +S V KDPP
Sbjct: 71 TVRISLVTKDPP 82
>BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein.
Length = 548
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3
Query: 429 SQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPA 608
++ A P V I+EQP + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP
Sbjct: 11 AEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPG 70
Query: 609 TIVVSCVNKDPP 644
T+ +S V KDPP
Sbjct: 71 TVRISLVTKDPP 82
>BC014095-1|AAH14095.1| 246|Homo sapiens RELA protein protein.
Length = 246
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3
Query: 429 SQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPA 608
++ A P V I+EQP + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP
Sbjct: 11 AEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPG 70
Query: 609 TIVVSCVNKDPP 644
T+ +S V KDPP
Sbjct: 71 TVRISLVTKDPP 82
>BC011603-1|AAH11603.1| 220|Homo sapiens RELA protein protein.
Length = 220
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3
Query: 429 SQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPA 608
++ A P V I+EQP + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP
Sbjct: 11 AEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPG 70
Query: 609 TIVVSCVNKDPP 644
T+ +S V KDPP
Sbjct: 71 TVRISLVTKDPP 82
>Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcription
factor NF-kappaB protein.
Length = 550
Score = 92.3 bits (219), Expect = 1e-18
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3
Query: 429 SQSAPPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPA 608
++ A P V I+EQP + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP
Sbjct: 11 AEPAQASGPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGRRSTDTTKTHPTIKINGYTGPG 70
Query: 609 TIVVSCVNKDPP 644
T+ +S V KDPP
Sbjct: 71 TVRISLVTKDPP 82
>L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription
factor subunit protein.
Length = 537
Score = 87.4 bits (207), Expect = 4e-17
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 453 PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVN 632
P + EQP + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP T+ +S V
Sbjct: 6 PLIFPAEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVT 65
Query: 633 KDPP 644
KDPP
Sbjct: 66 KDPP 69
>X61499-1|CAA43716.1| 415|Homo sapiens NF-kB subunit protein.
Length = 415
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>X61498-1|CAA43715.1| 933|Homo sapiens NF-kB subunit protein.
Length = 933
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>U20816-1|AAA68171.1| 220|Homo sapiens nuclear factor kappa-B2
protein.
Length = 220
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>U09609-1|AAA21462.2| 669|Homo sapiens p80HT protein.
Length = 669
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>S76638-1|AAB21124.1| 900|Homo sapiens p50-NF-kappa B homolog
protein.
Length = 900
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>BT009769-1|AAP88771.1| 899|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 899
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>BC002844-1|AAH02844.1| 899|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 899
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>AY865619-1|AAW56071.1| 900|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 900
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>AL121928-1|CAC08399.1| 900|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 900
Score = 84.2 bits (199), Expect = 4e-16
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
+ AP A P +VIVEQP + RFRY CEG S G LPG SS KTYPT+KIC+Y+GP
Sbjct: 29 EPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGP 88
Query: 606 ATIVVSCV-NKDPP 644
A I V V + DPP
Sbjct: 89 AKIEVDLVTHSDPP 102
>AY455868-1|AAR13863.1| 534|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog A, nuclear
factor of kappa l protein.
Length = 534
Score = 83.0 bits (196), Expect = 8e-16
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3
Query: 459 VVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVNKD 638
++ +P + +RFRYKCEGRSAGS+PG ST KT+PTIKI Y GP T+ +S V KD
Sbjct: 4 LIFPAEPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKD 63
Query: 639 PP 644
PP
Sbjct: 64 PP 65
>X75042-1|CAA52954.1| 619|Homo sapiens c-rel protein.
Length = 619
Score = 80.2 bits (189), Expect = 6e-15
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +3
Query: 453 PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVN 632
P + I+EQP + +RFRYKCEGRSAGS+PG ST N+TYP+I+I +Y G + ++ V
Sbjct: 8 PYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVT 67
Query: 633 KDPP 644
K+ P
Sbjct: 68 KNDP 71
>DQ314888-1|ABC40747.1| 619|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog (avian)
protein.
Length = 619
Score = 80.2 bits (189), Expect = 6e-15
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +3
Query: 453 PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVN 632
P + I+EQP + +RFRYKCEGRSAGS+PG ST N+TYP+I+I +Y G + ++ V
Sbjct: 8 PYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVT 67
Query: 633 KDPP 644
K+ P
Sbjct: 68 KNDP 71
>BC117191-1|AAI17192.1| 587|Homo sapiens REL protein protein.
Length = 587
Score = 80.2 bits (189), Expect = 6e-15
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +3
Query: 453 PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVN 632
P + I+EQP + +RFRYKCEGRSAGS+PG ST N+TYP+I+I +Y G + ++ V
Sbjct: 8 PYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVT 67
Query: 633 KDPP 644
K+ P
Sbjct: 68 KNDP 71
>Z47748-1|CAB94757.1| 969|Homo sapiens NFKB1 protein.
Length = 969
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVV 620
P P + I+EQP + RFRY CEG S G LPG SS K+YP +KIC+Y GPA ++V
Sbjct: 38 PTDGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIV 97
Query: 621 SCV 629
V
Sbjct: 98 QLV 100
>M58603-1|AAA36360.1| 968|Homo sapiens nuclear factor kappa-B DNA
binding subunit protein.
Length = 968
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVV 620
P P + I+EQP + RFRY CEG S G LPG SS K+YP +KIC+Y GPA ++V
Sbjct: 38 PTDGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIV 97
Query: 621 SCV 629
V
Sbjct: 98 QLV 100
>AY223820-1|AAO30127.1| 968|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 1 (p105)
protein.
Length = 968
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVV 620
P P + I+EQP + RFRY CEG S G LPG SS K+YP +KIC+Y GPA ++V
Sbjct: 38 PTDGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIV 97
Query: 621 SCV 629
V
Sbjct: 98 QLV 100
>AF213884-1|AAF35232.1| 968|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 1 protein.
Length = 968
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVV 620
P P + I+EQP + RFRY CEG S G LPG SS K+YP +KIC+Y GPA ++V
Sbjct: 38 PTDGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIV 97
Query: 621 SCV 629
V
Sbjct: 98 QLV 100
>M55643-1|AAA36361.1| 969|Homo sapiens factor KBF1 protein.
Length = 969
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
Q A P A P + I+EQP + RFRY CEG S G LPG SS K+YP +KIC+Y GP
Sbjct: 34 QMALPTADGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGP 93
Query: 606 ATIVVSCV 629
A ++V V
Sbjct: 94 AKVIVQLV 101
>BC051765-1|AAH51765.1| 969|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 1 (p105)
protein.
Length = 969
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 432 QSAPPRA--PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGP 605
Q A P A P + I+EQP + RFRY CEG S G LPG SS K+YP +KIC+Y GP
Sbjct: 34 QMALPTADGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGP 93
Query: 606 ATIVVSCV 629
A ++V V
Sbjct: 94 AKVIVQLV 101
>DQ314887-1|ABC40746.1| 579|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog B, nuclear
factor of kappa l protein.
Length = 579
Score = 62.5 bits (145), Expect = 1e-09
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATI-V 617
P P +VI EQP + +RFRY+CEGRSAGS+ G SST +KT P I++ G + V
Sbjct: 121 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV 180
Query: 618 VSC-VNKDPP 644
+C V KD P
Sbjct: 181 TACLVWKDWP 190
>BC028013-1|AAH28013.1| 579|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog B, nuclear
factor of kappa l protein.
Length = 579
Score = 62.5 bits (145), Expect = 1e-09
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATI-V 617
P P +VI EQP + +RFRY+CEGRSAGS+ G SST +KT P I++ G + V
Sbjct: 121 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV 180
Query: 618 VSC-VNKDPP 644
+C V KD P
Sbjct: 181 TACLVWKDWP 190
>AF043463-1|AAC82346.1| 579|Homo sapiens I-REL protein.
Length = 579
Score = 62.5 bits (145), Expect = 1e-09
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATI-V 617
P P +VI EQP + +RFRY+CEGRSAGS+ G SST +KT P I++ G + V
Sbjct: 121 PGPQPHLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV 180
Query: 618 VSC-VNKDPP 644
+C V KD P
Sbjct: 181 TACLVWKDWP 190
>M83221-1|AAA36127.1| 579|Homo sapiens I-Rel protein.
Length = 579
Score = 59.7 bits (138), Expect = 9e-09
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 441 PPRAPSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATI-V 617
P P +VI EQP + + FRY+CEGRSAGS+ G SST +KT P I++ G + V
Sbjct: 121 PGPQPHLVITEQPKQRGMPFRYECEGRSAGSILGESSTEASKTLPAIELRDCGGLREVEV 180
Query: 618 VSC-VNKDPP 644
+C V KD P
Sbjct: 181 TACLVWKDWP 190
>BC037281-1|AAH37281.1| 215|Homo sapiens LOC439951 protein protein.
Length = 215
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 380 PTFGEGPPPVCLXEHGESIRAPASTKRGNSRATSQQSPQIPVQMRGP 520
P + PPP G +RA + R S Q PQ P RGP
Sbjct: 104 PPLWKRPPPPRAARPGPRLRASGPARLTGRRQPSPQRPQPPPYWRGP 150
>BX538115-1|CAD98025.1| 525|Homo sapiens hypothetical protein
protein.
Length = 525
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 221 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 261
>BC121808-1|AAI21809.1| 530|Homo sapiens RIC8A protein protein.
Length = 530
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 226 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 266
>BC121807-1|AAI21808.1| 530|Homo sapiens RIC8A protein protein.
Length = 530
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 226 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 266
>BC111499-1|AAI11500.1| 530|Homo sapiens RIC8A protein protein.
Length = 530
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 226 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 266
>BC011821-1|AAH11821.2| 467|Homo sapiens RIC8A protein protein.
Length = 467
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 163 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 203
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +2
Query: 398 PPPVCLXEHGESIRAPASTKRGNSRATSQQSPQIPVQMRGPVGGLAPGRVQYSGEQNLSY 577
PPPV EH RAP +R N + V RGPVG P + S + + S
Sbjct: 100 PPPVP-AEH----RAPPQIRRPNREVRPLRKEMAGVGARGPVGRAHP--ISKSEKPSTSR 152
Query: 578 NQDMLLQGTGHHSRVLRQQGS 640
++D +G R Q G+
Sbjct: 153 DKDYRARGRDDKGRKNMQDGA 173
>AL390088-1|CAB98211.1| 531|Homo sapiens hypothetical protein,
similar to AK001482(BAA91717.1) [Homo sapiens] protein.
Length = 531
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 227 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 267
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +2
Query: 398 PPPVCLXEHGESIRAPASTKRGNSRATSQQSPQIPVQMRGPVGGLAPGRVQYSGEQNLSY 577
PPPV EH RAP +R N + V RGPVG P + S + + S
Sbjct: 100 PPPVP-AEH----RAPPQIRRPNREVRPLRKEMAGVGARGPVGRAHP--ISKSEKPSTSR 152
Query: 578 NQDMLLQGTGHHSRVLRQQGS 640
++D +G R Q G+
Sbjct: 153 DKDYRARGRDDKGRKNMQDGA 173
>AK027461-1|BAB55126.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ14555 fis, clone NT2RM2001855. ).
Length = 421
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 117 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 157
>AK022870-1|BAB14282.1| 291|Homo sapiens protein ( Homo sapiens
cDNA FLJ12808 fis, clone NT2RP2002373. ).
Length = 291
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 568 VLFSGVLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGAR 446
VLF+ LD+ E + + LYR+L LL C I T G R
Sbjct: 117 VLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDR 157
>AY950800-1|AAY25182.1| 112|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 112
Score = 29.9 bits (64), Expect = 8.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 432 QSAPPRAPSVVIVE---QPASKALRFRYKCEGRSAG-SLPGVSSTPENKTYPTIKICSYK 599
Q P +AP ++I E +P+ RF G +A ++ G+ + E Y CSY
Sbjct: 37 QQRPGKAPKLIIYEVIKRPSGVPDRFSGSKSGNTASLTISGLQTEDEADYY----CCSYA 92
Query: 600 GPATIVV 620
GP T VV
Sbjct: 93 GPYTYVV 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,643,027
Number of Sequences: 237096
Number of extensions: 2051586
Number of successful extensions: 5015
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5015
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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