Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_B20
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical p...    31   0.70 
AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical ...    31   0.70 
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p...    29   3.7  
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ...    29   3.7  
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ...    28   4.9  
U55374-4|AAB36866.2|  589|Caenorhabditis elegans Immunoglobulin-...    28   6.5  
AF043704-3|AAK21473.2|  823|Caenorhabditis elegans Sulfate perme...    28   6.5  
Z66565-7|CAE17924.1|  287|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z48230-4|CAO78721.1|  484|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z48230-3|CAA88263.1|  515|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z48006-7|CAO78729.1|  484|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z48006-6|CAA88051.1|  515|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF000198-9|AAB53057.4|  684|Caenorhabditis elegans Hypothetical ...    27   8.6  
AC024796-10|AAK29896.1|  623|Caenorhabditis elegans Hypothetical...    27   8.6  

>Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical
            protein Y37A1C.1a protein.
          Length = 972

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +2

Query: 266  IIHAGDAGLPIGIAEQN-DPNQPNELNINDVFEAISLADPTFGEGPPPVCLXEHGESIRA 442
            ++  G  GL    A +N +  +PN LN+  + E     + T    P  V L E  E+ R 
Sbjct: 875  VLRNGQVGLDFSEAMRNLNLIEPNRLNVPPIEEKEKEKEKTNENSPETVHLIEKDETART 934

Query: 443  PASTKRGNSRATSQQS 490
              S   G+SR + + S
Sbjct: 935  DKSGDDGSSRLSYRGS 950


>AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical
            protein Y37A1C.1a protein.
          Length = 972

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +2

Query: 266  IIHAGDAGLPIGIAEQN-DPNQPNELNINDVFEAISLADPTFGEGPPPVCLXEHGESIRA 442
            ++  G  GL    A +N +  +PN LN+  + E     + T    P  V L E  E+ R 
Sbjct: 875  VLRNGQVGLDFSEAMRNLNLIEPNRLNVPPIEEKEKEKEKTNENSPETVHLIEKDETART 934

Query: 443  PASTKRGNSRATSQQS 490
              S   G+SR + + S
Sbjct: 935  DKSGDDGSSRLSYRGS 950


>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
            protein Y37A1C.1c protein.
          Length = 1210

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +2

Query: 266  IIHAGDAGLPIGIAEQN-DPNQPNELNINDVFEAISLADPTFGEGPPPVCLXEHGESIRA 442
            ++  G  GL    A +N +  +PN LN+  + E     + T    P  V L E  E+ R 
Sbjct: 875  VLRNGQVGLDFSEAMRNLNLIEPNRLNVPPIEEKEKEKEKTNENSPETVHLIEKDETART 934

Query: 443  PASTKRGNS 469
              S   G+S
Sbjct: 935  DKSGDDGSS 943


>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
            protein Y37A1C.1c protein.
          Length = 1210

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +2

Query: 266  IIHAGDAGLPIGIAEQN-DPNQPNELNINDVFEAISLADPTFGEGPPPVCLXEHGESIRA 442
            ++  G  GL    A +N +  +PN LN+  + E     + T    P  V L E  E+ R 
Sbjct: 875  VLRNGQVGLDFSEAMRNLNLIEPNRLNVPPIEEKEKEKEKTNENSPETVHLIEKDETART 934

Query: 443  PASTKRGNS 469
              S   G+S
Sbjct: 935  DKSGDDGSS 943


>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
           protein Y20F4.4 protein.
          Length = 1319

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +2

Query: 437 RAPASTKRGNSRATSQQSPQIPVQMRGPVGGLAPGRVQYSGEQNLSYNQDMLLQGTGHHS 616
           R+ +  +R  S+  S Q P  PVQ R   G   P   + +     S N ++   GTG   
Sbjct: 263 RSSSRPRRDRSQPRSYQPPVDPVQDRSRNGRATPMGTRGAPSPASSQNGNLFRNGTGSQH 322

Query: 617 R 619
           R
Sbjct: 323 R 323


>U55374-4|AAB36866.2|  589|Caenorhabditis elegans
           Immunoglobulin-like cell adhesionmolecule family protein
           3, isoform a protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +2

Query: 308 EQNDPNQPNELNI---NDVFEAISLADPTFGEGPPPVCLXEHG 427
           + N+P     LNI   ND FE    A   F + PP VC   +G
Sbjct: 538 DYNEPKTKANLNIHQENDYFEPPPNAPRLFAQHPPEVCDTAYG 580


>AF043704-3|AAK21473.2|  823|Caenorhabditis elegans Sulfate permease
           family protein 6 protein.
          Length = 823

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 553 VLDTPGSEPADRPSHLYRNLRALLAGCSTITTLGARG 443
           VLD   +EP   P+  Y  L  ++  CSTI  +   G
Sbjct: 637 VLDEKHAEPEPNPADQYERLTHIIIDCSTIIYVDLMG 673


>Z66565-7|CAE17924.1|  287|Caenorhabditis elegans Hypothetical
           protein T04F8.9 protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 371 LADPTFGEGPPPVCLXEHGESIRAPASTKRGNSRATSQQSPQIP 502
           L+     E P P     H   IRAP+  +R  +R   +QSP++P
Sbjct: 190 LSAEDMSESPTPTSPI-HRIYIRAPSPVRRHPARKPRRQSPRVP 232


>Z48230-4|CAO78721.1|  484|Caenorhabditis elegans Hypothetical
           protein F19C6.4b protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 83  KIILLQRLIKFCTQISLFFT 24
           KI+ L R++K+CT+I + FT
Sbjct: 76  KIVKLTRVMKWCTEIEVLFT 95


>Z48230-3|CAA88263.1|  515|Caenorhabditis elegans Hypothetical
           protein F19C6.4a protein.
          Length = 515

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 83  KIILLQRLIKFCTQISLFFT 24
           KI+ L R++K+CT+I + FT
Sbjct: 76  KIVKLTRVMKWCTEIEVLFT 95


>Z48006-7|CAO78729.1|  484|Caenorhabditis elegans Hypothetical
           protein F19C6.4b protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 83  KIILLQRLIKFCTQISLFFT 24
           KI+ L R++K+CT+I + FT
Sbjct: 76  KIVKLTRVMKWCTEIEVLFT 95


>Z48006-6|CAA88051.1|  515|Caenorhabditis elegans Hypothetical
           protein F19C6.4a protein.
          Length = 515

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 83  KIILLQRLIKFCTQISLFFT 24
           KI+ L R++K+CT+I + FT
Sbjct: 76  KIVKLTRVMKWCTEIEVLFT 95


>AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical
           protein F58H7.1 protein.
          Length = 607

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 278 GDAGLPIGIAEQNDPNQPNELN-IND 352
           G  G P G    N PN PN LN +ND
Sbjct: 201 GQIGSPFGFHGPNSPNGPNGLNGLND 226


>AF000198-9|AAB53057.4|  684|Caenorhabditis elegans Hypothetical
           protein T28F2.7 protein.
          Length = 684

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 464 YHAWCSRGRGLTRHVL*GKQEEGPRRTW 381
           YH++ S G+GL+R  L    ++G + TW
Sbjct: 451 YHSFNSYGKGLSRGALMWLTKQGKQETW 478


>AC024796-10|AAK29896.1|  623|Caenorhabditis elegans Hypothetical
           protein Y48G1C.7 protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = +2

Query: 278 GDAGLPIGIAEQNDPNQPN----ELNINDVFEAISLADPTFGEGPPPVCLXE 421
           G  G  + + E+   N+P     E  INDV E + + +P   +  PP  L E
Sbjct: 541 GTVGDDVNLEEEVHENEPKVYTGEKQINDVLEQVVVEEPNHHDDHPPHELLE 592


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,411,696
Number of Sequences: 27780
Number of extensions: 308824
Number of successful extensions: 786
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)