Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_B20
(645 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 108 5e-26
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 108 5e-26
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.8
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 108 bits (259), Expect = 5e-26
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +3
Query: 453 PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVN 632
P V I+EQPASKALRFRY+CEGRSAGS+PGV+ST ENKT+PTIKI YKG A +VVSCV
Sbjct: 45 PYVEIIEQPASKALRFRYECEGRSAGSIPGVNSTSENKTFPTIKIVGYKGRALVVVSCVT 104
Query: 633 KDPP 644
KD P
Sbjct: 105 KDQP 108
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 108 bits (259), Expect = 5e-26
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +3
Query: 453 PSVVIVEQPASKALRFRYKCEGRSAGSLPGVSSTPENKTYPTIKICSYKGPATIVVSCVN 632
P V I+EQPASKALRFRY+CEGRSAGS+PGV+ST ENKT+PTIKI YKG A +VVSCV
Sbjct: 45 PYVEIIEQPASKALRFRYECEGRSAGSIPGVNSTSENKTFPTIKIVGYKGRALVVVSCVT 104
Query: 633 KDPP 644
KD P
Sbjct: 105 KDQP 108
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 215 ITSSSDKRERRDSYYYNIIHAGDAGLPIGIAEQNDPNQP 331
I ++++ + YYNII+ +P+ + N P +P
Sbjct: 323 IHNNNNYKNYNKKLYYNIINIEQIPVPVPVYCGNFPPRP 361
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 110 YYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 110 YYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 110 YYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 110 YYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 110 YYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 110 YYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 114 YYNIINIEQIPVPVPIYCGNFPPRP 138
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 110 YYNIINIEQIPVPVPIYCGNFPPRP 134
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 257 YYNIIHAGDAGLPIGIAEQNDPNQP 331
YYNII+ +P+ I N P +P
Sbjct: 335 YYNIINIEQIPVPVPIYCGNFPPRP 359
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,721
Number of Sequences: 438
Number of extensions: 3908
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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