Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_B16
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0624 - 19434168-19435352                                         31   0.58 
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571           30   1.3  
02_01_0383 + 2776526-2776632,2777579-2777835,2777915-2778366,277...    30   1.8  
06_01_0675 + 4937309-4937354,4937606-4937718,4937810-4937905,493...    27   9.4  
01_03_0111 - 12638078-12639328,12640886-12641146                       27   9.4  
01_01_0864 + 6732553-6733602                                           27   9.4  

>08_02_0624 - 19434168-19435352
          Length = 394

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 493 LYSDVYPKITTHYTIHPRDKDPRWKDVNMERVAEETDILIIG 618
           +Y+D  P  TT ++   RDK P+  DV     +EE   ++IG
Sbjct: 257 VYTDTLPPATTSWSASHRDKRPKLSDVAAASCSEEEVRVMIG 298


>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
          Length = 527

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 562 WKDVNMERVAEETDILIIGGGPAG 633
           W+        EE+D+++IGGGP G
Sbjct: 27  WRGYAAAAAGEESDVVVIGGGPGG 50


>02_01_0383 +
           2776526-2776632,2777579-2777835,2777915-2778366,
           2778845-2779102
          Length = 357

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
 Frame = +1

Query: 388 FHESS*IGTAVVLKMAVAIVSSARQVGR---LTNAARRLYSDVYPKITTHYTIHPRDKDP 558
           F E S I     L  A  + SSA  +     LT   + L  D     T H    P  +  
Sbjct: 55  FAERSLIYHRDYLTNATIVTSSAVNITEQAVLTADGQSLAYDYLVIATGHALTSPGSRSE 114

Query: 559 RWKDVNMER--VAEETDILIIGGGPAG 633
           R K+   ++  +     +LIIGGGP G
Sbjct: 115 RIKEFQRDKGKIESSESVLIIGGGPTG 141


>06_01_0675 + 4937309-4937354,4937606-4937718,4937810-4937905,
            4938003-4938059,4938145-4938300,4938402-4938486,
            4938727-4938817,4938896-4939060,4939150-4939345,
            4939593-4939731,4940187-4941874,4942575-4942765,
            4942850-4942994
          Length = 1055

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 445  VSSARQVGRLTNAAR-RLYSDVYPKITTHYTIHPRDKDPRWKDVNMERVAEETDILIIGG 621
            V     VGR  +  R R Y ++   +   + I  + +DP   D  +  V  E DIL++G 
Sbjct: 945  VQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGD 1004

Query: 622  GP 627
             P
Sbjct: 1005 DP 1006


>01_03_0111 - 12638078-12639328,12640886-12641146
          Length = 503

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +1

Query: 592 EETDILIIGGGPAG 633
           EE+D++++GGGP G
Sbjct: 38  EESDVVVVGGGPGG 51


>01_01_0864 + 6732553-6733602
          Length = 349

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = +1

Query: 466 GRLTNAARRLY-SDVY-----PKITTHYTIHPRDKDPRWKDVNMERVAEETDILIIGGG 624
           GR+ +   R Y  D Y     P    HY  + +D+ P   D+++E   + T   ++GGG
Sbjct: 156 GRMPSKPSRAYREDWYWRSLPPPPYVHYQGYEKDEAPPGYDISVEHPCKITATAVVGGG 214


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,064,714
Number of Sequences: 37544
Number of extensions: 268196
Number of successful extensions: 570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)