Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_B16
         (634 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S69232-1|AAC60628.1|  617|Homo sapiens electron transfer flavopr...    76   1e-13
BC011890-1|AAH11890.1|  617|Homo sapiens electron-transferring-f...    76   1e-13
AF449444-1|AAN03724.1|  617|Homo sapiens electron transfer flavo...    76   1e-13
D21255-1|BAA04799.1|  693|Homo sapiens OB-cadherin-2 protein.          31   3.4  
AF060370-2|AAD27755.1|   94|Homo sapiens cadherin-11 protein.          31   3.4  

>S69232-1|AAC60628.1|  617|Homo sapiens electron transfer
           flavoprotein-ubiquinone oxidoreductase protein.
          Length = 617

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +1

Query: 481 AARRLYSDVYPKITTHYTIHPRDKDPRWKDVNMERVAEETDILIIGGGPAG 633
           A R   +   P+ITTHYTI+PRDKD RW+ VNMER AEE D++I+G GPAG
Sbjct: 30  AIRWSSTSTVPRITTHYTIYPRDKDKRWEGVNMERFAEEADVVIVGAGPAG 80


>BC011890-1|AAH11890.1|  617|Homo sapiens
           electron-transferring-flavoprotein dehydrogenase
           protein.
          Length = 617

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +1

Query: 481 AARRLYSDVYPKITTHYTIHPRDKDPRWKDVNMERVAEETDILIIGGGPAG 633
           A R   +   P+ITTHYTI+PRDKD RW+ VNMER AEE D++I+G GPAG
Sbjct: 30  AIRWSSTSTVPRITTHYTIYPRDKDKRWEGVNMERFAEEADVVIVGAGPAG 80


>AF449444-1|AAN03724.1|  617|Homo sapiens electron transfer
           flavoprotein ubiquinone oxidoreductase protein.
          Length = 617

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +1

Query: 481 AARRLYSDVYPKITTHYTIHPRDKDPRWKDVNMERVAEETDILIIGGGPAG 633
           A R   +   P+ITTHYTI+PRDKD RW+ VNMER AEE D++I+G GPAG
Sbjct: 30  AIRWSSTSTVPRITTHYTIYPRDKDKRWEGVNMERFAEEADVVIVGAGPAG 80


>D21255-1|BAA04799.1|  693|Homo sapiens OB-cadherin-2 protein.
          Length = 693

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = -2

Query: 621 PTNNEDVRLLRYAFHIYIFPSWILISWMYCIMGCYFRI 508
           P+  ED+RLL   F + +F S++ ++  +C++G + ++
Sbjct: 640 PSPREDMRLLYLGFQLMLF-SYVKVNRRFCLLGVFIKL 676


>AF060370-2|AAD27755.1|   94|Homo sapiens cadherin-11 protein.
          Length = 94

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = -2

Query: 621 PTNNEDVRLLRYAFHIYIFPSWILISWMYCIMGCYFRI 508
           P+  ED+RLL   F + +F S++ ++  +C++G + ++
Sbjct: 41  PSPREDMRLLYLGFQLMLF-SYVKVNRRFCLLGVFIKL 77


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,823,149
Number of Sequences: 237096
Number of extensions: 1539885
Number of successful extensions: 2239
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2239
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)