Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_B11
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450...    50   1e-06
Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical pr...    34   0.072
Z93381-1|CAB07604.1|  509|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81472-3|CAB03888.2|  468|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450
           family protein 44A1 protein.
          Length = 489

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
 Frame = +2

Query: 95  IRSAVRS--RNSNRC--SMSTKPHKSLRTIDEMPHKKSLPIIGT----KFDLFS-AGGGK 247
           +R ++R+   N  +C  S ++ P+   RT  E+P  + +P+IG     K+ + S A   +
Sbjct: 1   MRRSIRNLAENVEKCPYSPTSSPNTPPRTFSEIPGPREIPVIGNIGYFKYAVKSDAKTIE 60

Query: 248 NLHKYIDMRHKQLGPIFYERL-TGKTKLVFISDPTHMKSLFLNLEGKYPAHI-LPEPWVL 421
           N +++++  +K+ G I  E L  G+  +V I DP  ++++ L  +GK P  + L E    
Sbjct: 61  NYNQHLEEMYKKYGKIVKENLGFGRKYVVHIFDPADVQTV-LAADGKTPFIVPLQETTQK 119

Query: 422 YEKLYGSKRGLFFMDGEDWLINRRIMNKHLLREDS 526
           Y ++ G   GL  ++G +W   R  +   ++R  S
Sbjct: 120 YREMKGMNPGLGNLNGPEWYRLRSSVQHAMMRPQS 154


>Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical
           protein K09A11.2 protein.
          Length = 491

 Score = 34.3 bits (75), Expect = 0.072
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
 Frame = +2

Query: 248 NLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLEG---KYPAHILPEPWV 418
           N+ KY D+  K  GP F   +      + ++D  H+K  F+N +G    Y AH  PE  +
Sbjct: 46  NVQKYFDVLSKTYGPCF--TIWIPFPAIVLTDYEHIKDAFVN-QGDTFTYRAHRSPETLL 102

Query: 419 LYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLRE 520
                     G+   DG+ W + RR   K +LR+
Sbjct: 103 PVH----DHTGILASDGDHWRLQRRTSLK-ILRD 131


>Z93381-1|CAB07604.1|  509|Caenorhabditis elegans Hypothetical
           protein F28G4.1 protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
 Frame = +2

Query: 326 LVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLY------GSKRGLFFMDGEDWLIN 487
           L +++ P H     L +   +   ++ E W  ++K +        KR + F+D    L N
Sbjct: 236 LWYLTGPGHEYDRHLKIVTDFTKTVIKEKWEEFQKFHVDPVVKTDKRSMAFLDLLLELRN 295

Query: 488 RRIMNKHLLREDSDVWL 538
             +MN+  +RE+ D ++
Sbjct: 296 EGLMNEDDIREEVDTFM 312


>Z81472-3|CAB03888.2|  468|Caenorhabditis elegans Hypothetical
           protein C16D6.2 protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +2

Query: 290 PIFYERLTGKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGS 442
           P+ Y  L  + +  FI    H     LNLEG   + +L  P +     YGS
Sbjct: 310 PLLYAVLNLQLRAAFIDLMPHWLRRHLNLEGDNSSPLLNHPTMTITNKYGS 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,060,800
Number of Sequences: 27780
Number of extensions: 332043
Number of successful extensions: 796
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)