Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_B09
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    28   0.22 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   3.6  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   8.3  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   8.3  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   8.3  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   8.3  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   8.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   8.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 171  SRARPG-DSLRAAHQAGHARLRVGPRHQTKHPAETGVEVGASRALRISARTNAR 329
            S A PG D   AA   G A        Q     ETG+  G S  LR++ +T+AR
Sbjct: 1507 SEAPPGTDGAAAAPTGGAAVTNATSILQVYAAYETGLPSGTSLKLRVTPKTSAR 1560


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 96   LQVHLQRDAVDARGLGEGAVRAAAESRARPGDSLRAA 206
            LQ HL RDA     + EGA R  A+ + R  D  RAA
Sbjct: 1045 LQRHLLRDADSWSRICEGAKRITAQLQ-RAWDEERAA 1080


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 82  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 261
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 262 P 264
           P
Sbjct: 157 P 157


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 82  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 261
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 262 P 264
           P
Sbjct: 157 P 157


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 82  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 261
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 262 P 264
           P
Sbjct: 157 P 157


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 82  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 261
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 262 P 264
           P
Sbjct: 157 P 157


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 82  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 261
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 262 P 264
           P
Sbjct: 157 P 157


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 82  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 261
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTKFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 262 P 264
           P
Sbjct: 157 P 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,056
Number of Sequences: 2352
Number of extensions: 11201
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)