Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_B09
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 33 0.23
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 0.93
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 30 1.6
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.8
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 29 3.8
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 29 3.8
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 5.0
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 28 5.0
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 28 6.6
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 27 8.7
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 27 8.7
U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein. 27 8.7
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +1
Query: 25 SETRTITRALTMVYESDFYTTRRPYRSTYSVTRSTLGDWEKVPFV-PRPSLVPDPVTAF- 198
++ TIT +L+ VY + + R SV L ++ + P + P T
Sbjct: 140 NKEETIT-SLSEVYPTGSFVQIIEVRDQGSVLELVLSAHRRIRALEPIDEITPKNETPLN 198
Query: 199 GRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVL--STVGQRER 363
GRR + AS P+T PP +A +AP +S E+ + S G++++
Sbjct: 199 GRRARGKRAASATSPLTPPPSPPPLAPSVASVAPEISATEEKEEKTTPPSATGEKQK 255
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +1
Query: 160 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRAR-- 333
PRP + D R P AS ++ IPPK ESK+ P+ P + + ++RA
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKPKQAVQLKSRAARD 503
Query: 334 ----VLSTVGQRERAFEAD 378
T GQR A E +
Sbjct: 504 EPGGGAQTAGQRRAAAELE 522
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +1
Query: 160 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRAR-- 333
PRP + D R P AS ++ IPPK ESK+ P+ P + + ++RA
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKPKQAVQLKSRAARD 503
Query: 334 ----VLSTVGQRERAFEAD 378
T GQR A E +
Sbjct: 504 EPGGGAQTAGQRRAAAELE 522
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 214 PGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARV--LSTVGQRERAFEADPL 384
P T AS L+P P PE + P P P+ +T V T G+++ EA PL
Sbjct: 628 PVTEASPLNPQPPPPPSPSPEPEPEPKPPVTPPKNETVDPVHENGTSGEKDGTPEAQPL 686
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 88 RRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPD 183
R P+ S+Y T S+LG WE +PF+ P++ D
Sbjct: 301 RYPFYSSYDST-SSLGFWEMLPFLFVPAIFDD 331
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 160 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAP 300
PRP + D R P AS ++ IPPK ESK+ P+ P
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKP 490
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 160 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAP 300
PRP + D R P AS ++ IPPK ESK+ P+ P
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKP 490
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 160 PRPSLVPDPVTAFGRRTKP-GTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQ 321
P PS + KP GT+ P + PP+P+ ++P+ P P +Q
Sbjct: 200 PIPSPSASSIAEESLDDKPSGTKMPAQPPPQQHPPPPQPQQIMSPMPPQAPPSQQ 254
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 398 SRGVPRGSASNARSRCP--TVERTRARVCSRGDT*GARGANFDSGFGGMFCLV 246
S+G +GS R CP + + + CS+ D +N SGFG MF +V
Sbjct: 456 SKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPDPTLLIDSNKSSGFGLMFWIV 508
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 398 SRGVPRGSASNARSRCP--TVERTRARVCSRGDT*GARGANFDSGFGGMFCLV 246
S+G +GS R CP + + + CS+ D +N SGFG MF +V
Sbjct: 828 SKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPDPTLLIDSNKSSGFGLMFWIV 880
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +1
Query: 241 PVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADPLGTPRDHMDVLLA 420
PV +Q PP+ AP+A P + +A+ V Q +A P + +
Sbjct: 185 PVVQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVV 244
Query: 421 QAHGRPL 441
QA +P+
Sbjct: 245 QAPPKPI 251
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +1
Query: 151 PFVPRPSLVPDPVTAFGRRTKPGTRAS--VLDPVTKQNIPPKPESKLAPLAPYVSPREQT 324
P PRPS +FG P T S L P + + + + +P P +
Sbjct: 30 PTSPRPS----SSDSFGPSAAPSTSLSPPFLSPSYSMDYIIEAMTSSSSTSPVPPP--VS 83
Query: 325 RARVLSTVGQRERAFEADPLGTPRDHMDVLLAQAHGRPLHAAHRH 459
+R ++ V R A P+G R H Q + LHA H H
Sbjct: 84 ASRPVAPVVARVEGLRAVPVGHRRQHSSPGHLQQFQQELHARHHH 128
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 156 RAAAESRARPGDSL--RAAHQAGHARLRVGPRHQTKHPAETGVEVGAS 293
R+ + SRA S R+ HQ HAR H+++ A VGAS
Sbjct: 350 RSRSRSRATVPRSAQYRSEHQTEHARTGSSSHHESRSRAAAAAPVGAS 397
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 559 DQLPTLASESDTRQRTTLPPRSPLSTWRSYCSK 461
+Q T+A E+D R + PPRS ++Y S+
Sbjct: 99 NQSGTIAQETDNRNASNFPPRSTTRRGQTYESR 131
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 171 TRPRHERHLLPVPER--RPRHAVGGPVGPTRRVEVTLVYH 58
+RP +ER LP + R H++G +GP R + T YH
Sbjct: 33 SRPHYERRQLPAMQHTLRHNHSMGSLMGP-RELPFTHGYH 71
>U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein.
Length = 562
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 425 AWASSTSMWSRGVPRGSASNARSRCPTVERTRARVCSRGDT*GARGAN 282
A+ W R + + N RSR + ARVC + D GAR AN
Sbjct: 230 AYKEHVYFWFREIASEAIDNNRSRSFQIYARVARVC-KNDKGGARPAN 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,946,034
Number of Sequences: 27780
Number of extensions: 236374
Number of successful extensions: 873
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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