Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_B05
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099927-3|AAZ32795.1|  893|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF099927-1|AAZ32794.1|  955|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC199241-1|ABO33279.1|  343|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF045646-8|AAK29830.1|  541|Caenorhabditis elegans Udp-glucurono...    28   5.0  
Z68320-3|CAA92707.3|  477|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AF099927-3|AAZ32795.1|  893|Caenorhabditis elegans Hypothetical
           protein T04C4.1b protein.
          Length = 893

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 418 RSQLHQLTRWSSSRNRRKTTVPGGQFSRTRRLSLTCTYAEHDIE 549
           +S +  L  W +  +R   T P   FSR R +S+T    +HDI+
Sbjct: 228 QSTVKSLDGWRTRTSRSIMTTPEA-FSRVRHISITFGEQQHDID 270


>AF099927-1|AAZ32794.1|  955|Caenorhabditis elegans Hypothetical
           protein T04C4.1a protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 418 RSQLHQLTRWSSSRNRRKTTVPGGQFSRTRRLSLTCTYAEHDIE 549
           +S +  L  W +  +R   T P   FSR R +S+T    +HDI+
Sbjct: 289 QSTVKSLDGWRTRTSRSIMTTPEA-FSRVRHISITFGEQQHDID 331


>AC199241-1|ABO33279.1|  343|Caenorhabditis elegans Hypothetical
           protein 2RSSE.1 protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 352 SPRAMAASIQFYLFHSC*HDTGGRRMDD 269
           +P A+A S+   LFH+C HD    R++D
Sbjct: 172 NPNAIAISVAPSLFHTCIHDGRTARVED 199


>AF045646-8|AAK29830.1|  541|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein52 protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -3

Query: 180 ARRLPFLVHRFLASLGKNLSVIAYFLFDFVIDTCGLSL 67
           A R P L+HR L  +G+N+SV  Y+  D +I  C L L
Sbjct: 475 ASRNP-LLHRNLNLIGQNMSVFEYYCLD-IISFCILLL 510


>Z68320-3|CAA92707.3|  477|Caenorhabditis elegans Hypothetical
           protein W07A12.6 protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 351 LHEPWLLAFNFISFTRVNTTPVE 283
           LH P +  FN++SF +  T+P+E
Sbjct: 415 LHMPVVYTFNWLSFLQTATSPIE 437


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,050,800
Number of Sequences: 27780
Number of extensions: 308035
Number of successful extensions: 755
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)