Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_A19
         (385 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   2.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   2.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   8.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   8.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   8.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 201 LEETNKVFKKEKDSKKGIAFSTCVSVNN 284
           + E N + + +KD+K+ ++ ST   +NN
Sbjct: 423 MTEYNGLTEPKKDNKRKLSDSTMNKINN 450


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 118 VHYLSC*LVLGHNQILCNR 62
           VH+ +   +LGH+  LC R
Sbjct: 281 VHHANHHAILGHSGFLCER 299


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 236 RLQERHCIFNMRFCEQLHLSLFAHCERTG 322
           RLQE   + ++R  ++LHL   A  E  G
Sbjct: 226 RLQENSPLLDLRQLQELHLQRNAIVEIAG 254



 Score = 20.2 bits (40), Expect = 8.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 205 RRLTRFSKRRKTPRKALHFQHAFL*TTAFVTFRPLRANRI 324
           R L  F   R +  + L+ Q+  +     +TF PLR+  I
Sbjct: 855 RELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEI 894


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 205 SNTSLSPNSHISLADASGTHFAMTCCKD 122
           +NT L+PN+ I +A+ + T   M  C D
Sbjct: 326 TNTELNPNTFILVAENNTT---MVFCND 350


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 236 FLLFENLVSLLQYKFIAKFTYF 171
           +L+F + +S     F+  FTY+
Sbjct: 206 YLIFSSTISFYLPLFVMVFTYY 227


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 306 WAKSDKCSCSQKRMLK 259
           WA +D  + +QKR LK
Sbjct: 136 WAITDPINYAQKRTLK 151


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 306 WAKSDKCSCSQKRMLK 259
           WA +D  + +QKR LK
Sbjct: 136 WAITDPINYAQKRTLK 151


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 306 WAKSDKCSCSQKRMLK 259
           WA +D  + +QKR LK
Sbjct: 136 WAITDPINYAQKRTLK 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,233
Number of Sequences: 438
Number of extensions: 1834
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)