Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_A18
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   2.6  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   5.9  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   7.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.8  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   7.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 255 KSLRSIRAESSIKKEVEPARRSNYANGRIRN 347
           + L  +  ES   KEV   +  N+   R+RN
Sbjct: 73  EKLNQLEIESDNSKEVNDKKEENFIVDRLRN 103


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 175 LTIPVPEGVDKPVSPKIEKIVSEITNLNLLEVSELSQVLKKRLNLP 312
           LT   P G  KP+SP+ E+++  +            + LK+  N P
Sbjct: 319 LTPVSPYGYVKPISPEQEELIHRLVYFQNEYEQPSEEDLKRITNQP 364


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 126 IKMFCSSAGGNTNSHTSDYPSS 191
           +++ CS AGG + S   D   S
Sbjct: 77  LRLLCSIAGGTSESQWEDVTGS 98


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 64  KIKNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT 165
           K+K +  ++ I +V L +R     S+ +QE  +T
Sbjct: 48  KLKIIEILQFILDVRLDYRISCLLSIFKQEFDET 81


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 523 PTVVKADISKDEAEKLXEALTK 588
           P+  + D+SKD+ E L    T+
Sbjct: 238 PSANRTDLSKDDYESLVHLYTR 259


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 64  KIKNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT 165
           K+K +  ++ I +V L +R     S+ +QE  +T
Sbjct: 16  KLKIIEILQFILDVRLDYRISCLLSIFKQEFDET 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.133    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,452
Number of Sequences: 438
Number of extensions: 2714
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)