Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_A06
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    46   2e-07
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    37   2e-04
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    28   0.068
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.36 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.8  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 46.4 bits (105), Expect = 2e-07
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
 Frame = +2

Query: 287 LGTGAFSEVRLIE-SKESGQLFACKIIDKKALKGKEDSLENEIRVLKRFSXXXXXXXXXX 463
           LG G F  V L++ + +S + FA K + K  +   E   +  I   KR            
Sbjct: 373 LGVGGFGRVELVQIAGDSSRSFALKQMKKAQIV--ETRQQQHIMSEKRIMGEADCDF--- 427

Query: 464 XVFSHPNIVQLLETYEDKNKVYLVMELVTGGELFDRIVEKGSYTEKDASNLIXQVLEAVD 643
                  +V+L +T++D+  +Y++ME   GGEL+  + +KG + +         V+EA D
Sbjct: 428 -------VVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFD 480

Query: 644 YMH 652
           Y+H
Sbjct: 481 YLH 483


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 31/112 (27%), Positives = 55/112 (49%)
 Frame = +2

Query: 317 LIESKESGQLFACKIIDKKALKGKEDSLENEIRVLKRFSXXXXXXXXXXXVFSHPNIVQL 496
           L E K + +L+A KI+ KK +  ++D +E  + V KR                 P +VQL
Sbjct: 2   LAERKGTDELYAIKIL-KKDIIIQDDDVECTM-VEKRVLALSTKP---------PFLVQL 50

Query: 497 LETYEDKNKVYLVMELVTGGELFDRIVEKGSYTEKDASNLIXQVLEAVDYMH 652
              ++  +++Y VME V GG+L  +I + G + E  A     ++   + ++H
Sbjct: 51  HSCFQTMDRLYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLH 102


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 28.3 bits (60), Expect = 0.068
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 575 VEKGSYTEKDASNLIXQVLEAVDYMH 652
           V +  Y+E DAS+ I Q+LE+V + H
Sbjct: 1   VAREFYSEADASHCIQQILESVHHCH 26


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 470 FSHPNIVQLLETYEDKNKVYLVMELVTGGEL 562
           F HPN++ L       N V ++ E +  G L
Sbjct: 691 FEHPNVIFLQGVVTKSNPVMIITEFMENGSL 721


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 482 NIVQLLETYEDKNKVYLVMELVTGGEL 562
           N+V+ L+ Y DK  V   M+L+  G L
Sbjct: 63  NLVENLDNYNDKEAVNEFMQLLKHGML 89


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 482 NIVQLLETYEDKNKVYLVMELVTGGEL 562
           N+V+ L+ Y DK  V   M+L+  G L
Sbjct: 63  NLVENLDNYNDKEAVNEFMQLLKHGML 89


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -2

Query: 642 STAS--NTCXIKLDASFSV*EPFS 577
           STAS  N C I LD  +++ +PF+
Sbjct: 130 STASILNLCVISLDRYWAITDPFT 153


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 539 ELVTGGELFDR 571
           ELVT GELF R
Sbjct: 752 ELVTAGELFGR 762


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,149
Number of Sequences: 438
Number of extensions: 3268
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)