Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_P23
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 192 6e-49
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 192 8e-49
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 192 8e-49
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 192 8e-49
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 192 8e-49
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 192 8e-49
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 192 8e-49
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 192 8e-49
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 83 1e-15
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1... 29 9.9
AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein pr... 29 9.9
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr... 29 9.9
AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens ... 29 9.9
AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protei... 29 9.9
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. 29 9.9
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 192 bits (469), Expect = 6e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVIRQRKSYRRKD 92
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 93 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 192 bits (468), Expect = 8e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKD 92
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 93 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 192 bits (468), Expect = 8e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKD 92
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 93 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 192 bits (468), Expect = 8e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKD 92
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 93 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 192 bits (468), Expect = 8e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKD 92
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 93 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 192 bits (468), Expect = 8e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKD 92
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 93 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 192 bits (468), Expect = 8e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 27 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKD 86
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 87 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125
Score = 35.5 bits (78), Expect = 0.15
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 73 GGSAGAKFRISLGLPXGS 126
GGS+GAKFRISLGLP G+
Sbjct: 1 GGSSGAKFRISLGLPVGA 18
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 17 GAVINCADNTGAK 29
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 192 bits (468), Expect = 8e-49
Identities = 88/99 (88%), Positives = 96/99 (96%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRD 332
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+D
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKD 92
Query: 333 GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 449
GVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 93 GVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/43 (86%), Positives = 42/43 (97%)
Frame = +3
Query: 153 GAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 281
GAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 33 GAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 55 MSKRGRGGSAGAKFRISLGLPXGS 126
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 30.3 bits (65), Expect = 5.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 122 GAVINCADNTGXK 160
GAVINCADNTG K
Sbjct: 23 GAVINCADNTGAK 35
>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
protein.
Length = 1906
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 448 RGHRSAHSLATGPVMAEPFISPLLLTMTP 362
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477
>AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein
protein.
Length = 568
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 448 RGHRSAHSLATGPVMAEPFISPLLLTMTP 362
+G AH L+ GP+ P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139
>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
protein.
Length = 1285
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 448 RGHRSAHSLATGPVMAEPFISPLLLTMTP 362
+G AH L+ GP+ P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856
>AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ16493 fis, clone CTONG3004550, weakly similar
to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
).
Length = 852
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 284 YLFPEFRFTLFDCGHNHVPG 225
Y+ P F L CGHN++PG
Sbjct: 379 YIHPNFTVVLTVCGHNYMPG 398
>AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens
cDNA FLJ46632 fis, clone TRACH2024730, weakly similar
to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
).
Length = 673
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 284 YLFPEFRFTLFDCGHNHVPG 225
Y+ P F L CGHN++PG
Sbjct: 200 YIHPSFTVVLTVCGHNYMPG 219
>AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protein
7a5 protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 284 YLFPEFRFTLFDCGHNHVPG 225
Y+ P F L CGHN++PG
Sbjct: 379 YIHPSFTVVLTVCGHNYMPG 398
>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
Length = 1644
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 448 RGHRSAHSLATGPVMAEPFISPLLLTMTP 362
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,998,976
Number of Sequences: 237096
Number of extensions: 1904456
Number of successful extensions: 4020
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4020
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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