Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_P20
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 271 3e-73
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 238 3e-63
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.8
X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 29 3.8
U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 29 3.8
U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 27 8.7
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 271 bits (664), Expect = 3e-73
Identities = 126/168 (75%), Positives = 141/168 (83%), Gaps = 1/168 (0%)
Frame = +3
Query: 150 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 329
DEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A KYNV +KCAT
Sbjct: 17 DEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCAT 76
Query: 330 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 509
ITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV W KPIIIGRHAH
Sbjct: 77 ITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAH 136
Query: 510 ADQYKATDFVVPGAGTLEIIFKPESG-EAIKHVVHEYKGAGVXLAMFN 650
ADQYKATDFVVPGAG LEI F G + I+ V ++KG GV L+M+N
Sbjct: 137 ADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYN 184
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 238 bits (582), Expect = 3e-63
Identities = 109/168 (64%), Positives = 131/168 (77%), Gaps = 1/168 (0%)
Frame = +3
Query: 150 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 329
DEMTRIIW IK KLILP+LD+++ YDLG+E RD+T+DQVTID A AI +++VGIKCAT
Sbjct: 39 DEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKCAT 98
Query: 330 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 509
ITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV GW +PI IGRHA
Sbjct: 99 ITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAF 158
Query: 510 ADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEY-KGAGVXLAMFN 650
DQYK TD V+P TL+++ G H V+++ K GV LAM+N
Sbjct: 159 GDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMYN 206
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 201 PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 380
P +D V ++ R + + + KK+ + T+ PDE+ VE KL K
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233
Query: 381 KSPNGTIRNI 410
+ PN T+R +
Sbjct: 2234 RLPNATLREV 2243
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 359 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 240
F+NSL I S TF +F+ STI+ + +I LI IFH
Sbjct: 59 FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93
>X75331-1|CAA53080.1| 620|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 620
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 297 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 187
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal
acetylcholinesterase protein1 protein.
Length = 620
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 297 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 187
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical
protein T08A9.13 protein.
Length = 120
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 240 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 374
++ + + + ++C +A+ +Y+V K T+T E++ E KK
Sbjct: 44 LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +3
Query: 324 ATITPDEKRVE--EFKLKKMWKSPNGTIRNILGGTVF-REAIICKNIPRLVTGW--DKPI 488
A + KRV+ E +L++ W+S GT++ +L ++ EA+ C+ W DK
Sbjct: 2591 AEVQRAHKRVQNSEHQLRQTWESEKGTLQKLLEWMLWCDEAVQCEQ-------WLSDKET 2643
Query: 489 IIGRHAHADQYKATDFVVPGAGTLEIIFKPES 584
+ R D A + ++ G E + +S
Sbjct: 2644 QVARGELGDTTDAVEMLIKGHSAFEETVRKQS 2675
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +3
Query: 324 ATITPDEKRVE--EFKLKKMWKSPNGTIRNILGGTVF-REAIICKNIPRLVTGW--DKPI 488
A + KRV+ E +L++ W+S GT++ +L ++ EA+ C+ W DK
Sbjct: 2591 AEVQRAHKRVQNSEHQLRQTWESEKGTLQKLLEWMLWCDEAVQCEQ-------WLSDKET 2643
Query: 489 IIGRHAHADQYKATDFVVPGAGTLEIIFKPES 584
+ R D A + ++ G E + +S
Sbjct: 2644 QVARGELGDTTDAVEMLIKGHSAFEETVRKQS 2675
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +3
Query: 324 ATITPDEKRVE--EFKLKKMWKSPNGTIRNILGGTVF-REAIICKNIPRLVTGW--DKPI 488
A + KRV+ E +L++ W+S GT++ +L ++ EA+ C+ W DK
Sbjct: 2591 AEVQRAHKRVQNSEHQLRQTWESEKGTLQKLLEWMLWCDEAVQCEQ-------WLSDKET 2643
Query: 489 IIGRHAHADQYKATDFVVPGAGTLEIIFKPES 584
+ R D A + ++ G E + +S
Sbjct: 2644 QVARGELGDTTDAVEMLIKGHSAFEETVRKQS 2675
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,029,725
Number of Sequences: 27780
Number of extensions: 319763
Number of successful extensions: 804
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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