Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_P16
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99270-1|CAA67665.1|  295|Homo sapiens unknown protein.                31   3.6  
X64877-1|CAA46096.1|  270|Homo sapiens serum protein protein.          30   8.3  
M65293-1|AAA35947.1|  330|Homo sapiens factor H homologue protein.     30   8.3  
M65292-1|AAA35946.1|  330|Homo sapiens factor H homologue protein.     30   8.3  
BC107771-1|AAI07772.1|  330|Homo sapiens complement factor H-rel...    30   8.3  
BC022283-1|AAH22283.1|  270|Homo sapiens complement factor H-rel...    30   8.3  
BC016755-1|AAH16755.1|  330|Homo sapiens complement factor H-rel...    30   8.3  
AY533507-1|AAS45401.1|  796|Homo sapiens ARC/mediator transcript...    30   8.3  
AL139418-1|CAI21979.1|  270|Homo sapiens complement factor H-rel...    30   8.3  
AL049741-4|CAB53063.1|  330|Homo sapiens complement factor H-rel...    30   8.3  
AL049741-3|CAI19622.1|  271|Homo sapiens complement factor H-rel...    30   8.3  

>X99270-1|CAA67665.1|  295|Homo sapiens unknown protein.
          Length = 295

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = -3

Query: 547 LGPRSKCLRLVCMFPVVLFANNSFQAPEPQFASRHFYFAPKTVART*CQSGSCPPRPGLL 368
           L  + +C R +  +P   ++      P+    S H YF  ++ ++  C++  CPP P  L
Sbjct: 50  LSVQERCRRSILFYP---YSTRFDSVPKKMPISTHLYFHERSCSQQLCRTPHCPP-PSPL 105

Query: 367 VCP 359
             P
Sbjct: 106 AVP 108


>X64877-1|CAA46096.1|  270|Homo sapiens serum protein protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCAEEGWSPTPKCLRL-CFFPFV 92


>M65293-1|AAA35947.1|  330|Homo sapiens factor H homologue protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCTEEGWSPTPKCLRL-CFFPFV 92


>M65292-1|AAA35946.1|  330|Homo sapiens factor H homologue protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCTEEGWSPTPKCLRL-CFFPFV 92


>BC107771-1|AAI07772.1|  330|Homo sapiens complement factor
           H-related 1 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCTEEGWSPTPKCLRL-CFFPFV 92


>BC022283-1|AAH22283.1|  270|Homo sapiens complement factor
           H-related 2 protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCAEEGWSPTPKCLRL-CFFPFV 92


>BC016755-1|AAH16755.1|  330|Homo sapiens complement factor
           H-related 1 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCTEEGWSPTPKCLRL-CFFPFV 92


>AY533507-1|AAS45401.1|  796|Homo sapiens ARC/mediator
           transcriptional coactivator subunit protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -2

Query: 446 PLLLRTKNSGSNVMSVGQLSSASGSPCLSPKASITRFGCGS--YSVSLNISLKRAC 285
           P+L RT +   +  S G+       PC+S K   + F CGS  ++   N+   R C
Sbjct: 732 PVLARTTSPSGSTAS-GKTKERRRGPCVSRKMGASLFLCGSEEHAYVFNMQTNRVC 786


>AL139418-1|CAI21979.1|  270|Homo sapiens complement factor
           H-related 2 protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCAEEGWSPTPKCLRL-CFFPFV 92


>AL049741-4|CAB53063.1|  330|Homo sapiens complement factor
           H-related 1 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCTEEGWSPTPKCLRL-CFFPFV 92


>AL049741-3|CAI19622.1|  271|Homo sapiens complement factor
           H-related 1 protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 571 RLXCXESDLGPRSKCLRLVCMFPVV 497
           R+ C E    P  KCLRL C FP V
Sbjct: 69  RITCTEEGWSPTPKCLRL-CFFPFV 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,648,968
Number of Sequences: 237096
Number of extensions: 2495756
Number of successful extensions: 5570
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5570
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)